| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0087 |
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| Symbol | |
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| ID | 7272257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 96811 |
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| End bp | 97686 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643568745 |
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| Product | coenzyme F420-reducing hydrogenase subunit beta |
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| Protein accession | YP_002465204 |
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| Protein GI | 219850772 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
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| TIGRFAM ID | [TIGR03289] coenzyme F420 hydrogenase, subunit beta |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.127818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.061617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTATCAG ATAATTTCCT CGGAAACTAC GCATCGGTTG TTGCAGCACG CAGCACTGAT
AAGAGCATCC TCAAGGGTGC ACAGGACGGC GGGATCGTTA CCCAGCTCTT TGCCTATGCG
CTCGAAGAGG GTATCATCGA CGGCGCGATT GTAGCAGGGC CTGGCGACGA GCCATGGAAG
CCCGTCCCGG TCGTCGCAAC CACCGTTGAA GAGCTGCTCG CAGCACGCGG CACCAAGTAC
AACATCAGCC CGAACATGCA GCTGATCAAG GAAGCGACCA GATCCTACGG GCTCGACAAG
GTCGGTATCG TCGGCACACC CTGCCAGATC CAGGCGCTCC GCAAGGGGCA GCTCTATCCG
GTCGGCCTGC GGGACGTCCC CGACAAGATC GCCCTTGCAG TCGGTATCTT CTGCATGGAG
AACTTCCCGT ACCAGTCGAT CGTTCAGCTG GTCGAGGACC ACGCGAACAC CAAGCTCGAG
AATGTCACCA AGATGGACAT CGGGAAGGGC AAGTTCTGGG TTTACACCGG CCGCGGCGCA
TCCGTGCAGC TGCCTCTGAA GATCACCCAC AAGTACGAGC AGGCAGGCTG CCACGTCTGC
CTTGACTACG TCTCCAACCT TGCGGATGTC TCGACTGGTT CAGTCGGCAC GCCAGACGGC
TGGTCGACGG TCTTTGTCAG GACAAAGAAC GGCGGGGACA TCTGGGCAAA GGCTATTGCA
GCCGGATGCT TCGAGACCAA GCCGATGGAC TCTGTCAAGC CAGGGCTTGA CCTGGTCACC
AAGCTGGCCA CCGAGAAGAT CACCAAGAAC CAGAAGACGC TCGCAGAGCG TGCAACGTTC
GGTGTCGGCA AGGGTCTCCG GAACCCTTAC ATCTAA
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| Protein sequence | MVSDNFLGNY ASVVAARSTD KSILKGAQDG GIVTQLFAYA LEEGIIDGAI VAGPGDEPWK
PVPVVATTVE ELLAARGTKY NISPNMQLIK EATRSYGLDK VGIVGTPCQI QALRKGQLYP
VGLRDVPDKI ALAVGIFCME NFPYQSIVQL VEDHANTKLE NVTKMDIGKG KFWVYTGRGA
SVQLPLKITH KYEQAGCHVC LDYVSNLADV STGSVGTPDG WSTVFVRTKN GGDIWAKAIA
AGCFETKPMD SVKPGLDLVT KLATEKITKN QKTLAERATF GVGKGLRNPY I
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