Gene Mlab_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0012 
Symbol 
ID4795951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp12111 
End bp12983 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content53% 
IMG OID640098657 
Productcoenzyme F420-reducing hydrogenase subunit beta 
Protein accessionYP_001029457 
Protein GI124484841 
COG category[C] Energy production and conversion 
COG ID[COG1035] Coenzyme F420-reducing hydrogenase, beta subunit 
TIGRFAM ID[TIGR03289] coenzyme F420 hydrogenase, subunit beta 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATATC TTGGACAATA CAAGGCAGTC TACAAAGCCA AAGCCGGCTG TGAAGACATT 
CTCGCAAAGT CCCAGGACGG AGGAATCGTC ACAGCAATGT TTGCCTACGC ACTTGAGACA
GGCATTATTG ACGGAGCAAT CGTCGCAGGA CCAGGAGCAG AGCCGTACAA GCCTGAACCG
ATGATCGCCA CAACGGTCGA AGAACTCTTC GCAAGCCGTG GAACCAAATA CTCAGTCTCA
CCGAACCTTG CACTGATCAA AGAGGCAACC CGCAGCTATG GTCTTGACAA GATCGGTATC
GTCGGAACCC CATGCCAGAT CCAGGCAGTG CGCAAAGCAC AGCTCTACCC AATCGGTCTG
CGTGACGTCC CCGACAAGAT CGCTCTTGCA CTCGGTATCT TCTGTATGGA AAACTTCCCC
TACCAGGGAC TCTTCCAGAT GGTCGAAGAC CACTGTGCAA CCAAGATCGA CAATGTCACC
AAGATGGACA TCGGAAAGGG CAAATTCTCC GTCTACACCG AGCGCGGTGT AAACTCGCAG
ATCCCCTTAA AGGTTACTCA CAAGTATGAG CAGCCCGGAT GCCACGTCTG TCTCGACTAT
GTCGCAAACA TGGCAGATAT CTCAACCGGT TCCGTTGGAA CTCCGGACGG ATGGTCAACC
GTCTTCGTCC GCTCCGCAGC CGGTGAGGCA GCCTTCAACA AGGCAGTCGA AGCAGGCTGG
ATCATTGCCG AGTCAATGGA CGGCGTCAAG CCGGGTCTTG AACTCGTCGA GAAGCTTGCA
ACCGAGAAGA TCACCAAAAA CCAGAAGTAC CTTGAGCACA GAGCCCACAA GGAGCACGCA
GCTCTCAAAC CACTCCGTAA CCCCTACATC TAA
 
Protein sequence
MEYLGQYKAV YKAKAGCEDI LAKSQDGGIV TAMFAYALET GIIDGAIVAG PGAEPYKPEP 
MIATTVEELF ASRGTKYSVS PNLALIKEAT RSYGLDKIGI VGTPCQIQAV RKAQLYPIGL
RDVPDKIALA LGIFCMENFP YQGLFQMVED HCATKIDNVT KMDIGKGKFS VYTERGVNSQ
IPLKVTHKYE QPGCHVCLDY VANMADISTG SVGTPDGWST VFVRSAAGEA AFNKAVEAGW
IIAESMDGVK PGLELVEKLA TEKITKNQKY LEHRAHKEHA ALKPLRNPYI