| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1688 |
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| Symbol | |
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| ID | 6409345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1809756 |
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| End bp | 1810985 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711576 |
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| Product | coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein |
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| Protein accession | YP_001990691 |
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| Protein GI | 192290086 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGATC GCAACACCCC GTCTGCGCTG TGGACGCCGC CGCTGAACGC GCCGGCGGAG
CGCGAACTGT GCACCGACTG CGGCGTGTCG CGGATGAGCG ACCCGAAGCA GTGCGGCCAA
GCCTGCCAAT TCATCAAGCC GGACTATCCG GCGATGGAAC GACGGGTGCA TGGCCGCAAC
CGCGATGCCG CGACCGGGGA CGAAGCGTTC TTCGGCCCAT ATCGCCGGAT GGTGCAGGCG
GCGATGAAAC AGCCGCGTGA AGAGGCGCAG TGGACCGGCA TCACCACCAC GATCGCGCAG
CGGCTGCTGG AGACCGGTGC GGTCGACGCG GTGATCGCGA TGGCGCCGGA CCCGTCCGAC
AAATGGAAAC CGATGCCGGT GCTGGTGACC AAGCCGGAAG GCATGGCGCA GTGCCGCGGG
ATGCGAATGG GCTACGCACC GTCGCTGGCG CTGATCGAAC CGGCAATCGC GGCCGGCTAC
AAGCGGCTCG CGGTGATCGG CGTGCCCTGC CAGATCTACG CGCTGCGCCG GCTGCAGGAT
CAGCTCGGCC TCGAAAAGCT ATACGTGATC GGCACGCCCT GCTCGGACAA CACCACCACC
GAAGCGTTTC ACGGCTTCCT GGATCTGCTG TCCGACAAGC CCGAAACCAT CACCTATCTG
GAATTCCGCG CCGACTATCA CGTCGAGCTG CGGTTCGACG ACGGCAACGT CAAGGCGATC
CCGTTCCTAC TGCTGCCGAT ATCGAAATTG CCGCCGGACT TCTTCCCGAT CACCTGCCGC
ACCTGCGTCG ACTACACCAA TACGCTCGCC GACATCACCG TCGGTTATAT GGGCGGACGC
GGCGAGCAGT GGTTGCTGGT GCGCAACGAG CGCGGCGAGG AGCTGCTGAA GCTGCTCGGC
GACGACGTTC GCTTAAGCGA GCCGACCAGC GCGGGCAATC GCGTCGCACC GGTGAAGGGC
TTCCTCAAGA ACACCGAACT CGCTGCCGGC GGACTGCCGG TGCGCGGCAT GCCGAACTGG
CTGCGGCCGT TCATGGGATG GCTGATGCCG AAAGTCGGCC CGCGCGGAAT TGAATTCGCG
CGTGCGCGTG TCGAGATGAA GGCGGTCGAG ACCGTGCTGC ATCTGCGCCG GCACTACAAA
CACAAAATGA AGAACATGAT ACCCGCCCAT GTCTGGGCCC TGGTAAAGCC CTATGGGCTC
GAGCCGCAAG ACGGCGAGCG CCGCGACTAA
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| Protein sequence | MHDRNTPSAL WTPPLNAPAE RELCTDCGVS RMSDPKQCGQ ACQFIKPDYP AMERRVHGRN
RDAATGDEAF FGPYRRMVQA AMKQPREEAQ WTGITTTIAQ RLLETGAVDA VIAMAPDPSD
KWKPMPVLVT KPEGMAQCRG MRMGYAPSLA LIEPAIAAGY KRLAVIGVPC QIYALRRLQD
QLGLEKLYVI GTPCSDNTTT EAFHGFLDLL SDKPETITYL EFRADYHVEL RFDDGNVKAI
PFLLLPISKL PPDFFPITCR TCVDYTNTLA DITVGYMGGR GEQWLLVRNE RGEELLKLLG
DDVRLSEPTS AGNRVAPVKG FLKNTELAAG GLPVRGMPNW LRPFMGWLMP KVGPRGIEFA
RARVEMKAVE TVLHLRRHYK HKMKNMIPAH VWALVKPYGL EPQDGERRD
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