Gene Memar_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0331 
Symbol 
ID4847093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp310681 
End bp311700 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content66% 
IMG OID640115005 
Productcoenzyme F420 hydrogenase/dehydrogenase beta subunit 
Protein accessionYP_001046246 
Protein GI126178281 
COG category[C] Energy production and conversion 
COG ID[COG1035] Coenzyme F420-reducing hydrogenase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATGA AGACATTCAA AGACCTGAAG TCGGAGGTCT GGGATACAGA ACTCTGCTCC 
GGGTGCGGGG CGTGCGTGGC GGTCTGCCCG GCGGATGCCC TCCGGTTCGA GCCGGGGAAC
ACCGATACGC CGGTGAACAT CGGCTACTGC AAGGCCGAGA ACGACGGCGT GCCCTGCGGG
GCGTGCTACG CAGCCTGTCC GCGGGTCGAC CTCGCGGCGC AGGGGAAGAT GCTCGGACCG
TACGAGGATA TCGTCGCAGC CCGGGCGGTC TTCCCGGTTG AGCGCAAACA GAGCGGCGGC
GCGGTGACGG CGATCCTCGT CAACGCGCTC GATGAAGGAC TTATCGATGC GGTCGTCACC
GTGACGAGAG ACCCCTGGAC GATGAAACCG TCGTCTGCGG TGATCACCTC CTCAGAGGAA
CTCGTCCAGC ACGCCGGGAG CCGCTACTCC TGGTGGGTGC CGCTCCTTGC GTCCCTCAAG
GAAGCCGTGG TCACCCGGAA GTACCGCCGC GTCGCCGTCG TGGGCGTGCC CTGCGTGGCG
CGGGCGACCC AGGCGATCCG GGCGAGCGAC CACGAACTCC TCCGGCCCTA CGCGAAGGCG
ATCCGGCTCG TGATCGGCCT CTTCTGCACG GAGACCTTCG ACTACGCGAA ACTGGTCGAG
GGGAAACTGC AGTCCGAGAA GAAGATCGAG CCCTGGGAGA TCCGCCATCT GGACATCAAG
GGCAAACTGG ACGTCTACCT GCAGGACGAG CGGCACATCT CCATCCCCCT CGCAGAGCTA
GAGGAGTCCG TCCGCCCCGG ATGCCGGGTC TGCAACGACT TTACGGCGGT GAACGCGGAC
GTCTCCGCGG GTGCCGTCGG GTCGCCGGAC GGGTACACGA CGCTCGTCAT CCGTAACGAC
ATCGGAAGAG GGTTCGTCGA CCGTGCGGTC TGGCAGGGAA AACTCGCGAC CGGCAGCGCC
GTCGATCTCC CCGTCATCGA GCAGCTGGCC GCGCGGAAAG CGCAGCGCCG GCAGGAATAA
 
Protein sequence
MEMKTFKDLK SEVWDTELCS GCGACVAVCP ADALRFEPGN TDTPVNIGYC KAENDGVPCG 
ACYAACPRVD LAAQGKMLGP YEDIVAARAV FPVERKQSGG AVTAILVNAL DEGLIDAVVT
VTRDPWTMKP SSAVITSSEE LVQHAGSRYS WWVPLLASLK EAVVTRKYRR VAVVGVPCVA
RATQAIRASD HELLRPYAKA IRLVIGLFCT ETFDYAKLVE GKLQSEKKIE PWEIRHLDIK
GKLDVYLQDE RHISIPLAEL EESVRPGCRV CNDFTAVNAD VSAGAVGSPD GYTTLVIRND
IGRGFVDRAV WQGKLATGSA VDLPVIEQLA ARKAQRRQE