83 homologs were found in PanDaTox collection
for query gene Mboo_0476 on replicon NC_009712
Organism: Candidatus Methanoregula boonei 6A8



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009712  Mboo_0476  coenzyme F420-reducing hydrogenase subunit beta  100 
 
 
308 aa  633    Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.601068 
 
 
-
 
NC_011832  Mpal_0087  coenzyme F420-reducing hydrogenase subunit beta  70.07 
 
 
291 aa  441  9.999999999999999e-123  Methanosphaerula palustris E1-9c  Archaea  normal  0.127818  normal  0.061617 
 
 
-
 
NC_007796  Mhun_2329  coenzyme F420-reducing hydrogenase subunit beta  64.8 
 
 
288 aa  418  1e-116  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007355  Mbar_A0449  coenzyme F420-reducing hydrogenase subunit beta  64.36 
 
 
291 aa  417  9.999999999999999e-116  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009051  Memar_2177  coenzyme F420-reducing hydrogenase subunit beta  66.23 
 
 
298 aa  416  9.999999999999999e-116  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2290  coenzyme F420-reducing hydrogenase subunit beta  63.7 
 
 
291 aa  403  1e-111  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.107219 
 
 
-
 
NC_008942  Mlab_0012  coenzyme F420-reducing hydrogenase subunit beta  61.44 
 
 
290 aa  379  1e-104  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_009135  MmarC5_0646  coenzyme F420-reducing hydrogenase subunit beta  51.53 
 
 
282 aa  315  5e-85  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0076  coenzyme F420-reducing hydrogenase subunit beta  50.85 
 
 
282 aa  311  1e-83  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009975  MmarC6_1288  coenzyme F420-reducing hydrogenase subunit beta  50.85 
 
 
282 aa  303  3.0000000000000004e-81  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0193  coenzyme F420-reducing hydrogenase subunit beta  50.51 
 
 
282 aa  301  9e-81  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0630  coenzyme F420-reducing hydrogenase subunit beta  50.17 
 
 
282 aa  300  2e-80  Methanococcus maripaludis C7  Archaea  normal  normal  0.9157 
 
 
-
 
NC_009634  Mevan_0695  coenzyme F420-reducing hydrogenase subunit beta  50.51 
 
 
282 aa  298  9e-80  Methanococcus vannielii SB  Archaea  normal  0.507932  n/a   
 
 
-
 
NC_009635  Maeo_1042  coenzyme F420-reducing hydrogenase subunit beta  48.81 
 
 
282 aa  295  5e-79  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_008553  Mthe_0174  coenzyme F420 hydrogenase/dehydrogenase beta subunit  40.56 
 
 
362 aa  206  3e-52  Methanosaeta thermophila PT  Archaea  normal  0.318509  n/a   
 
 
-
 
NC_007355  Mbar_A0255  F420H2 dehydrogenase subunit F  31.6 
 
 
346 aa  159  6e-38  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007355  Mbar_A0881  coenzyme F420 hydrogenase, beta subunit  33.45 
 
 
387 aa  151  1e-35  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_0783  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  33.91 
 
 
337 aa  146  5e-34  Methanospirillum hungatei JF-1  Archaea  hitchhiker  0.00366682  normal  0.213871 
 
 
-
 
NC_007955  Mbur_2261  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein  33.71 
 
 
389 aa  142  5e-33  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_1095  coenzyme F420 hydrogenase/dehydrogenase beta subunit  31.58 
 
 
358 aa  137  2e-31  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_007955  Mbur_0619  nitrite and sulphite reductase  30.56 
 
 
639 aa  132  6e-30  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.00799056  n/a   
 
 
-
 
NC_009943  Dole_1150  coenzyme F420 hydrogenase/dehydrogenase beta subunit  31.32 
 
 
364 aa  131  1.0000000000000001e-29  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_0778  nitrite and sulphite reductase 4Fe-4S region  31.74 
 
 
618 aa  130  4.0000000000000003e-29  Methanococcus aeolicus Nankai-3  Archaea  normal  0.542223  n/a   
 
 
-
 
NC_009135  MmarC5_1595  coenzyme F420 hydrogenase/dehydrogenase beta subunit  32.64 
 
 
359 aa  129  5.0000000000000004e-29  Methanococcus maripaludis C5  Archaea  normal  0.502541  n/a   
 
 
-
 
NC_009975  MmarC6_0866  coenzyme F420 hydrogenase/dehydrogenase beta subunit  32.64 
 
 
359 aa  129  8.000000000000001e-29  Methanococcus maripaludis C6  Archaea  normal  0.161905  n/a   
 
 
-
 
NC_009635  Maeo_1303  coenzyme F420 hydrogenase/dehydrogenase beta subunit  31.1 
 
 
357 aa  128  1.0000000000000001e-28  Methanococcus aeolicus Nankai-3  Archaea  normal  0.808254  n/a   
 
 
-
 
NC_009637  MmarC7_1081  coenzyme F420 hydrogenase/dehydrogenase beta subunit  32.64 
 
 
359 aa  127  3e-28  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_013525  Tter_1334  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  30.74 
 
 
396 aa  125  1e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007955  Mbur_2371  F420H2 dehydrogenase subunit F  28.73 
 
 
343 aa  124  2e-27  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009051  Memar_0331  coenzyme F420 hydrogenase/dehydrogenase beta subunit  30.85 
 
 
339 aa  122  7e-27  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0662  coenzyme F420 hydrogenase beta subunit  34.71 
 
 
344 aa  119  7e-26  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.368347 
 
 
-
 
NC_009712  Mboo_1693  coenzyme F420 hydrogenase/dehydrogenase beta subunit  28.62 
 
 
340 aa  116  3.9999999999999997e-25  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.884047  normal  0.69888 
 
 
-
 
NC_011832  Mpal_2707  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  31.89 
 
 
341 aa  116  5e-25  Methanosphaerula palustris E1-9c  Archaea  normal  0.889848  normal  0.835032 
 
 
-
 
NC_008148  Rxyl_0964  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein  30.4 
 
 
400 aa  114  3e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0907338  n/a   
 
 
-
 
NC_013158  Huta_1326  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  28.75 
 
 
498 aa  108  2e-22  Halorhabdus utahensis DSM 12940  Archaea  normal  0.137293  n/a   
 
 
-
 
NC_013743  Htur_0242  Coenzyme F420 hydrogenase  29.08 
 
 
538 aa  103  3e-21  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_002936  DET0214  iron-sulfur cluster-binding protein/coenzyme F420-reducing hydrogenase, beta subunit, putative  28.73 
 
 
428 aa  102  7e-21  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0139  coenzyme F420 hydrogenase/dehydrogenase beta subunit  27.8 
 
 
428 aa  94.4  2e-18  Dehalococcoides sp. BAV1  Bacteria  normal  0.668002  n/a   
 
 
-
 
NC_007413  Ava_4214  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  24.72 
 
 
397 aa  93.2  6e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  0.14758  normal 
 
 
-
 
NC_008312  Tery_0742  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  26.77 
 
 
401 aa  89.7  6e-17  Trichodesmium erythraeum IMS101  Bacteria  decreased coverage  0.00706315  normal 
 
 
-
 
NC_011726  PCC8801_1364  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  27.04 
 
 
401 aa  89  8e-17  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1394  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  27.04 
 
 
401 aa  89  8e-17  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_2254  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  26.39 
 
 
402 aa  87.8  2e-16  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3552  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain-containing protein  24.34 
 
 
399 aa  87  3e-16  'Nostoc azollae' 0708  Bacteria  normal  0.935534  n/a   
 
 
-
 
NC_007604  Synpcc7942_1359  coenzyme F420 hydrogenase  26.67 
 
 
401 aa  87  3e-16  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0101  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  24.41 
 
 
397 aa  83.2  0.000000000000005  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0353763 
 
 
-
 
NC_013223  Dret_0422  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  24.02 
 
 
355 aa  78.2  0.0000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.664623 
 
 
-
 
NC_007925  RPC_1245  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  25.09 
 
 
409 aa  76.3  0.0000000000006  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.491733  unclonable  0.0000000241639 
 
 
-
 
NC_013743  Htur_3038  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  26.32 
 
 
418 aa  75.9  0.0000000000009  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011004  Rpal_1688  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  24.82 
 
 
409 aa  72.8  0.000000000007  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_0577  coenzyme F420 hydrogenase/dehydrogenase beta subunit  23.75 
 
 
374 aa  72  0.00000000001  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009135  MmarC5_1537  formate dehydrogenase, beta subunit (F420)  24.47 
 
 
375 aa  72.4  0.00000000001  Methanococcus maripaludis C5  Archaea  normal  0.0761099  n/a   
 
 
-
 
NC_009356  OSTLU_36251  predicted protein  27.49 
 
 
428 aa  72  0.00000000001  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.0805225  n/a   
 
 
-
 
NC_007778  RPB_4023  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  23.97 
 
 
410 aa  70.5  0.00000000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.53217  normal 
 
 
-
 
NC_009975  MmarC6_0813  coenzyme F420 hydrogenase/dehydrogenase beta subunit  24.11 
 
 
375 aa  70.5  0.00000000004  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_007958  RPD_3777  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  24.71 
 
 
410 aa  69.7  0.00000000005  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0498224  normal  0.0688938 
 
 
-
 
NC_009634  Mevan_1144  coenzyme F420 hydrogenase/dehydrogenase beta subunit  25 
 
 
375 aa  68.9  0.0000000001  Methanococcus vannielii SB  Archaea  normal  0.592396  n/a   
 
 
-
 
NC_009952  Dshi_3268  putative coenzyme F420 hydrogenase  26.04 
 
 
409 aa  67  0.0000000004  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.96965 
 
 
-
 
NC_011886  Achl_2944  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  24.36 
 
 
409 aa  67  0.0000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009637  MmarC7_1138  coenzyme F420 hydrogenase/dehydrogenase beta subunit  23.21 
 
 
375 aa  65.9  0.0000000008  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_007802  Jann_0300  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  26.82 
 
 
412 aa  65.1  0.000000001  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3479  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  24.79 
 
 
429 aa  64.3  0.000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009637  MmarC7_0542  coenzyme F420 hydrogenase/dehydrogenase beta subunit  25.1 
 
 
387 aa  63.9  0.000000003  Methanococcus maripaludis C7  Archaea  normal  0.428653  normal 
 
 
-
 
NC_011671  PHATR_43972  predicted protein  24.03 
 
 
536 aa  63.9  0.000000003  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.549222  n/a   
 
 
-
 
NC_007643  Rru_A0937  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  25.11 
 
 
410 aa  63.5  0.000000004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_1377  coenzyme F420 hydrogenase/dehydrogenase beta subunit  25.09 
 
 
387 aa  63.2  0.000000006  Methanococcus maripaludis C6  Archaea  decreased coverage  0.00118672  n/a   
 
 
-
 
NC_009135  MmarC5_0296  formate dehydrogenase, beta subunit (F420)  24.12 
 
 
387 aa  60.5  0.00000004  Methanococcus maripaludis C5  Archaea  normal  0.510341  n/a   
 
 
-
 
NC_013158  Huta_0177  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  23.92 
 
 
424 aa  56.2  0.0000007  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0188  coenzyme F420 hydrogenase/dehydrogenase beta subunit  25.48 
 
 
428 aa  55.8  0.0000008  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_2739  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  26.24 
 
 
391 aa  55.8  0.0000009  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009634  Mevan_0607  coenzyme F420 hydrogenase/dehydrogenase beta subunit  23.05 
 
 
387 aa  54.3  0.000003  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_011059  Paes_0603  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  21.37 
 
 
381 aa  53.5  0.000004  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.110275  normal 
 
 
-
 
NC_013235  Namu_4481  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  22.22 
 
 
418 aa  52  0.00001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_1791  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  25.3 
 
 
416 aa  51.6  0.00002  Chlorobium limicola DSM 245  Bacteria  decreased coverage  0.000000000803312  n/a   
 
 
-
 
NC_010803  Clim_0952  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  20.7 
 
 
381 aa  49.7  0.00007  Chlorobium limicola DSM 245  Bacteria  normal  0.529831  n/a   
 
 
-
 
NC_009051  Memar_1623  coenzyme F420 hydrogenase/dehydrogenase beta subunit  23.16 
 
 
421 aa  47.4  0.0003  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009051  Memar_1044  coenzyme F420 hydrogenase/dehydrogenase beta subunit  22.86 
 
 
412 aa  47.4  0.0003  Methanoculleus marisnigri JR1  Archaea  normal  0.0606051  n/a   
 
 
-
 
NC_007796  Mhun_3237  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  24.47 
 
 
392 aa  47  0.0004  Methanospirillum hungatei JF-1  Archaea  normal  0.0217745  normal 
 
 
-
 
NC_008789  Hhal_1640  coenzyme F420 hydrogenase/dehydrogenase beta subunit  24.48 
 
 
419 aa  46.2  0.0007  Halorhodospira halophila SL1  Bacteria  normal  0.326327  n/a   
 
 
-
 
NC_008942  Mlab_1058  hypothetical protein  24.57 
 
 
412 aa  45.1  0.002  Methanocorpusculum labreanum Z  Archaea  normal  0.550841  normal 
 
 
-
 
NC_007796  Mhun_1814  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  24.71 
 
 
414 aa  44.7  0.002  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_0924  coenzyme F420 hydrogenase/dehydrogenase beta subunit  23.28 
 
 
417 aa  44.3  0.003  Candidatus Methanoregula boonei 6A8  Archaea  normal  hitchhiker  0.00000000725534 
 
 
-
 
NC_009958  Dshi_4135  hypothetical protein  22.45 
 
 
440 aa  43.5  0.004  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>