Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1791 |
Symbol | |
ID | 6354620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1968133 |
End bp | 1969383 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642669394 |
Product | coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein |
Protein accession | YP_001943809 |
Protein GI | 189347280 |
COG category | [C] Energy production and conversion |
COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000803312 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCAC CACCGAAACT TGAAAATCCG AGATTTGACG AGCCGTTATG CAGCCGCTGC GGGCTCTGCA TGGGCAATGC ATGGGCAACA GCAGAGAGCC TGAAAAGCTG CGTATTCAAT ACCGGATGGC TTGGAGCTCA TGAAGAGAGG CTGTTCGGCA GAACCAGAAA CATGCACGAT GCCGATGAAC TGCGCTTCGG CATCTCTCGT GAACGCTTTA ACGCAGTCAT GAAAAAACCG CTCGAAGGCG CTCAATGGAG CGGCATAATT ACCGCTATTT CAACGGAAGC GCTTCAGACA GGTCTTGTTG ACGGGGTCGT AACCCTCCAG GGCACGACCT TTCAGCCGAA AGCGGTTCTG GCAACAACTG CGGAAGAGAT TCATGCCGCA AGGGGCAATA AACCGGTGCT CTCTCCGGTG CTTCAGGCAC TGCATACGGC CTGGAAAAAA AAGGTAAAAA AACTGCTGGT TGTCGGGGCA TCATGCCATG TGCATGTTCT GAGAGACTTT GCCGCAACGC ACCCCTGGCT CGACGGCATC GAACTGCTTG TCGTCGGCAT ACCCTGCACG GACAACCTCG AACCGGCCCA CCTGAAATGG GTATTCCGCC ATATCAGCCG CTCTCCCGAT ACCGTGCTGA ACTTCGAATT CATGCAGGAC TACAAGGTGC ACATCGTGCA CTCGACCGGA AAAGTCGAAA AGATTCCGTT TTTCAGTCTT CCCGCCGCAG TACTCAAAGT CGGCGTCTTC TCGAACAGCT GCATGAGCTG CTTCGACTAC ATCAACAGCC TCGCGGACAT TACCGTAGGA TATTTCGGAG CGCCCTATAC CGCTGACGGC AAAGAGCAGT GGATTCTGAT TCGTACCGAT AAAGGAAAAA AACTGTTCGA TCTGGTAAAA AACGATATCT CCGTCAGACC TGAAACCGGA AGCGGCGACA GCTTCGGAGC CGTCAAGGCA TCCATACAAC CGACCATCGG GCCCATCCTG CAGCCGCACC TGCTTGGCGA CAGGCGCTCC ATGCCGCTCT TTTTCGGCAA GCTGCTCAGC GCGCTCAAGG CAAAAAAAGG ACCCAGAGGC ATCGAATTCG CCCGATACTC CATCGACATC CACGCACTGA GAAACTACTT CTTCGTCAGA CATTACACCC CGGAACGACT CGACGTCCTC GTACCCGAGC ACATACGGCA TCTCGTGAAA CTGTACAACG TTACCGATTT CGACGATCTG CCCCCCCACA GTGAAAAATA A
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Protein sequence | MNPPPKLENP RFDEPLCSRC GLCMGNAWAT AESLKSCVFN TGWLGAHEER LFGRTRNMHD ADELRFGISR ERFNAVMKKP LEGAQWSGII TAISTEALQT GLVDGVVTLQ GTTFQPKAVL ATTAEEIHAA RGNKPVLSPV LQALHTAWKK KVKKLLVVGA SCHVHVLRDF AATHPWLDGI ELLVVGIPCT DNLEPAHLKW VFRHISRSPD TVLNFEFMQD YKVHIVHSTG KVEKIPFFSL PAAVLKVGVF SNSCMSCFDY INSLADITVG YFGAPYTADG KEQWILIRTD KGKKLFDLVK NDISVRPETG SGDSFGAVKA SIQPTIGPIL QPHLLGDRRS MPLFFGKLLS ALKAKKGPRG IEFARYSIDI HALRNYFFVR HYTPERLDVL VPEHIRHLVK LYNVTDFDDL PPHSEK
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