12 homologs were found in PanDaTox collection
for query gene Bfae_28460 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013172  Bfae_28460  transcriptional regulator, effector-binding domain/component  100 
 
 		 176 aa  355  2.9999999999999997e-97  Brachybacterium faecium DSM 4810  Bacteria  normal  0.19805  n/a   
 
 
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NC_012803  Mlut_22660  transcriptional regulator, effector-binding domain/component  39.74 
 
 		 168 aa  77.4  0.0000000000001  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
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NC_008541  Arth_0754  transcription activator, effector binding  29.73 
 
 		 156 aa  71.2  0.000000000006  Arthrobacter sp. FB24  Bacteria  normal  0.287281  n/a   
 
 
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NC_013093  Amir_6173  transcriptional activator ligand binding domain protein  34.59 
 
 		 158 aa  69.7  0.00000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0354767  n/a   
 
 
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NC_014151  Cfla_3492  transcriptional activator ligand binding domain protein  32.43 
 
 		 155 aa  60.5  0.00000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_4607  transcription activator, effector binding  32.56 
 
 		 156 aa  59.7  0.00000002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0684789  normal  1 
 
 
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NC_011886  Achl_2087  transcription activator effector binding  26.79 
 
 		 166 aa  59.3  0.00000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000102768 
 
 
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NC_007912  Sde_0005  hypothetical protein  34.19 
 
 		 157 aa  53.1  0.000002  Saccharophagus degradans 2-40  Bacteria  normal  0.251807  normal  0.30014 
 
 
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NC_013235  Namu_2459  transcriptional activator ligand binding domain protein  26.36 
 
 		 550 aa  46.2  0.0003  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000187562  normal  0.0403698 
 
 
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NC_011059  Paes_0318  transcription activator effector binding  22.36 
 
 		 157 aa  45.1  0.0005  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  0.289482 
 
 
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NC_008639  Cpha266_0304  transcription activator, effector binding  25.52 
 
 		 158 aa  43.9  0.001  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
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NC_013440  Hoch_2214  transcriptional activator ligand binding domain protein  28.18 
 
 		 210 aa  41.6  0.006  Haliangium ochraceum DSM 14365  Bacteria  normal  0.307481  normal  0.371698 
 
 
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