| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2459 |
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| Symbol | |
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| ID | 8448070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 2712209 |
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| End bp | 2713861 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645041573 |
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| Product | transcriptional activator ligand binding domain protein |
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| Protein accession | YP_003201817 |
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| Protein GI | 258652661 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4978] Transcriptional regulator, effector-binding domain/component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000187562 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0403698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGACCA GTGGGGTTGT CGAGCTTCTG GCCGCATTCG GTCTGGCCCC GCTGTTCCTG
GTCGCCGGGT TGCTGGCGGC CGGGTCGCTG GGCCGGCGCG GTCCGGGCCG ATACGCCGCG
GCCCGGCTGC TCAGGCTCGG TCTGCCGGCC GTCTTCTACG TGCTACTGGT GGACCCGATG
CTGCGCTGGT GGGTGGCCAG CGGGCAGGGC GATGATCGCC CGCTGCTGGC CTGGCTGACC
GACTGGACCG GCGGGCGAGG CTTGGGCCCG ATGTGGTTCG TCGTTGCCCT GCTGGGCTTC
TCGCTGATCT ATGCCGGCTG GCGCCGGCTG CGGCCGGTCG GCCCCAGCCG GCCGAGTGAG
CTGTCGATGA GCCGGCTGCT GACCCTCGCC GCCGGGATCG CCGCGCTCGA TCTGCTCACC
TGGCCCCGGG TGCCGGACAC CGTCGCCCGT TACTGGGATT TCGAATGGCC GCACTGGCAG
GCGGCCGCCG GCGTGTTCGT CCTGGGGGTG CTGGCCGGTG AGCGGCGCTG GTTTCGGGCG
CCGTCCCGAT TGCTGCTGCG GGTCTGCGGA TGTCTGTCAC TGGTCGCCCT GACCGGCCTG
GCCGGGCTGC CAGCCCTGTC CGTGCAACCC GGGAACACCG AGATTCCGCC CGGCTCCTGG
CAGGTCGTGA TCATGGCCGG GCTGGACGGA TTGACCGTGG TGCTGGCGAT GGTCTGGCTG
GTCGACCGGC TGCAGCGGCA CCAGGTGGGC CGCTCGCCAC TGCTGGCCGT CGGGGCGCGG
AGCTCCTACG GGGCCTACCT GGTCCACCCG GTGGTGCTCG TCGGCCTGTC CCTGGCGCTG
CGGTCGGCGA CCTGGGCGCC GGAGGCCAAA CTGGTCGTGG TGGTGGCGAT CGGGGTGCCG
GTCTCGTTCC TCATCGGTGG CCTGGGGAAC CGGCTGGCCG CAACCGTGCG CGCTGGATCG
GGCACCCACC GGCCGCGGGC CGGACGGCGC CCGGCCTCGA CCGGCGGCCG CGGTCACGCT
CTGCTCCCCG GCGATGGGCC CGGGGCCGGA GCGGCTTTGG GTTCCGGATC CTCCAAGAGC
TCGCCGAAAA AATGGTTGTC CGGCAGATCG GGACCAAATG CTCTGTGGCT GGCCGGCTGT
GACGGCCAGG ATTCGACCAT GACGACCTAT CCCATCGTGG TGCGGGAGAG CGCACCTCAC
TACGCGGCGA CCAGGACGGC GACGCTGGCC GTCACCGAGC TGCCGGGCTG GCTCGGTCAG
ACCTACCGCC AGGTCGCGAT GTCCCTGGGC ACGCACCGCC AGTACCCGGC GGACGGCCCG
TTCGCCCGGT ACCACCGGCT GCCGGACGGG CGCTTCCAGG TGACGGCCGG ATTCCCGGTA
GCCGAACGAC CGGTCGGGGA CGGCGACGTC ATCGCCGAAT GGGTTCCGGG TAGCCGGGTC
GCGGTGCTGC AGTACGCCGG CGACTACGGC TCGATGGAGC CGGCCTACCG GGCCCTGTCG
GAGTGGCTGA GCACGCACGA CGCGGTCGCC GTCGGCGACC CGTACGAGGT CTACCGCAGC
GACCCGCAGT CCGACCCGAA CCCGGCGACC CGACGCACTG ACATCGTGCA GCCGTTCGTG
CCGGCCGCAT CATCGGCGGC TGACCGCAAC TGA
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| Protein sequence | MLTSGVVELL AAFGLAPLFL VAGLLAAGSL GRRGPGRYAA ARLLRLGLPA VFYVLLVDPM
LRWWVASGQG DDRPLLAWLT DWTGGRGLGP MWFVVALLGF SLIYAGWRRL RPVGPSRPSE
LSMSRLLTLA AGIAALDLLT WPRVPDTVAR YWDFEWPHWQ AAAGVFVLGV LAGERRWFRA
PSRLLLRVCG CLSLVALTGL AGLPALSVQP GNTEIPPGSW QVVIMAGLDG LTVVLAMVWL
VDRLQRHQVG RSPLLAVGAR SSYGAYLVHP VVLVGLSLAL RSATWAPEAK LVVVVAIGVP
VSFLIGGLGN RLAATVRAGS GTHRPRAGRR PASTGGRGHA LLPGDGPGAG AALGSGSSKS
SPKKWLSGRS GPNALWLAGC DGQDSTMTTY PIVVRESAPH YAATRTATLA VTELPGWLGQ
TYRQVAMSLG THRQYPADGP FARYHRLPDG RFQVTAGFPV AERPVGDGDV IAEWVPGSRV
AVLQYAGDYG SMEPAYRALS EWLSTHDAVA VGDPYEVYRS DPQSDPNPAT RRTDIVQPFV
PAASSAADRN
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