| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6173 |
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| Symbol | |
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| ID | 8330384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 7236310 |
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| End bp | 7236786 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644946607 |
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| Product | transcriptional activator ligand binding domain protein |
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| Protein accession | YP_003103826 |
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| Protein GI | 256380166 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4978] Transcriptional regulator, effector-binding domain/component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0354767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCACCG AGCCGGAACT GGTCGAGTTG ACGCCGACGA CGACCGCGGT GGTGCGCGGG
GTGATCGGGT TCGCCGAGGT GCGCGACTTC TTCGACACCT CGTTCCAGCA GCTCCGGAGG
GTCCTGGCCG AGCAGGGCGT CATGCCGGTC GGGGCGGCGT TCGGGCTGTA CCGGGACGCG
AGCACGCACG GGCGGGAGGG CGCGCTGGCG CTGGAGGTCG GGTTCCCGGT CGGCTCCGGG
ATCGAGGCGG AGGGGGACGT CGTGCCGGGC GAGGTGCCGG GCGGGCTGGT CGCGCAGCTC
ACGCACGTCG GGGCGTTCGA CGAGCTGGAG GAGTCCTGGA AGCGGTTGGC CGCGTGGATG
GGGGCGCGCG GGGTGAGCCC CTCGACCACG CGGTGGGAGG TGTACACCAC CGAGCCGTCG
CCCGAGATGG ACCCCGCCGA GCTGCGGACC GAGCTGCACT GGGCCGTGGC GGACTGA
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| Protein sequence | MGTEPELVEL TPTTTAVVRG VIGFAEVRDF FDTSFQQLRR VLAEQGVMPV GAAFGLYRDA
STHGREGALA LEVGFPVGSG IEAEGDVVPG EVPGGLVAQL THVGAFDELE ESWKRLAAWM
GARGVSPSTT RWEVYTTEPS PEMDPAELRT ELHWAVAD
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