209 homologs were found in PanDaTox collection
for query gene BamMC406_6743 on replicon NC_010553
Organism: Burkholderia ambifaria MC40-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010553  BamMC406_6743  histone family protein nucleoid-structuring protein H-NS  100 
 
 
108 aa  218  1.9999999999999999e-56  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010087  Bmul_5701  histone family protein nucleoid-structuring protein H-NS  92.55 
 
 
94 aa  181  3e-45  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010070  Bmul_6182  hypothetical protein  71.7 
 
 
159 aa  164  4e-40  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.633203  normal  0.361807 
 
 
-
 
NC_008392  Bamb_6089  histone family protein nucleoid-structuring protein H-NS  60.75 
 
 
109 aa  138  3e-32  Burkholderia ambifaria AMMD  Bacteria  normal  0.817977  normal 
 
 
-
 
NC_010557  BamMC406_5851  histone family protein nucleoid-structuring protein H-NS  60.75 
 
 
109 aa  138  3e-32  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010087  Bmul_6044  histone family protein nucleoid-structuring protein H-NS  58.88 
 
 
116 aa  135  2e-31  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.304642 
 
 
-
 
NC_007509  Bcep18194_C7579  histone-like nucleoid-structuring protein H-NS  58.88 
 
 
109 aa  134  4e-31  Burkholderia sp. 383  Bacteria  normal  0.54905  normal 
 
 
-
 
NC_010512  Bcenmc03_6589  histone family protein nucleoid-structuring protein H-NS  58.88 
 
 
109 aa  132  9.999999999999999e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.768318  normal  0.0573169 
 
 
-
 
NC_008062  Bcen_5743  histone-like nucleoid-structuring protein H-NS  58.88 
 
 
109 aa  132  9.999999999999999e-31  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6107  histone family protein nucleoid-structuring protein H-NS  58.88 
 
 
109 aa  132  9.999999999999999e-31  Burkholderia cenocepacia HI2424  Bacteria  normal  0.525668  normal 
 
 
-
 
NC_008545  Bcen2424_6900  histone family protein nucleoid-structuring protein H-NS  55.77 
 
 
110 aa  123  9e-28  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6755  histone family protein nucleoid-structuring protein H-NS  53.85 
 
 
113 aa  118  1.9999999999999998e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.13631  normal 
 
 
-
 
NC_007650  BTH_II1324  H-NS histone family protein  57.94 
 
 
109 aa  109  1.0000000000000001e-23  Burkholderia thailandensis E264  Bacteria  normal  0.392706  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0040  H-NS histone family protein  57.01 
 
 
109 aa  107  6e-23  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1539  H-NS histone family protein  57.01 
 
 
109 aa  107  6e-23  Burkholderia pseudomallei 668  Bacteria  normal  0.167578  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1452  H-NS histone family protein  57.01 
 
 
109 aa  107  6e-23  Burkholderia pseudomallei 1106a  Bacteria  normal  0.338045  n/a   
 
 
-
 
NC_007952  Bxe_B2975  putative H-NS-like transcription regulator  39.56 
 
 
96 aa  66.2  0.0000000001  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6934  histone family protein nucleoid-structuring protein H-NS  38.46 
 
 
96 aa  65.1  0.0000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  0.909068  normal 
 
 
-
 
NC_010623  Bphy_4285  histone family protein nucleoid-structuring protein H-NS  39.56 
 
 
97 aa  64.3  0.0000000005  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0112  HNS-like transcriptional regulator  35.42 
 
 
100 aa  63.5  0.0000000008  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.00000000000000994611  normal 
 
 
-
 
NC_007510  Bcep18194_A3351  histone-like nucleoid-structuring protein H-NS  38.14 
 
 
98 aa  63.5  0.000000001  Burkholderia sp. 383  Bacteria  normal  normal  0.383074 
 
 
-
 
NC_007511  Bcep18194_B1833  histone-like nucleoid-structuring protein H-NS  36.96 
 
 
96 aa  63.5  0.000000001  Burkholderia sp. 383  Bacteria  normal  0.648369  normal  0.932582 
 
 
-
 
NC_008060  Bcen_2858  histone-like nucleoid-structuring protein H-NS  37.11 
 
 
98 aa  63.5  0.000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.259744  n/a   
 
 
-
 
NC_010681  Bphyt_3822  histone family protein nucleoid-structuring protein H-NS  35.42 
 
 
100 aa  63.2  0.000000001  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000137841  normal 
 
 
-
 
NC_008542  Bcen2424_0249  histone family protein nucleoid-structuring protein H-NS  37.11 
 
 
98 aa  63.5  0.000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0231  histone family protein nucleoid-structuring protein H-NS  37.11 
 
 
98 aa  63.5  0.000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II2010  H-NS histone family protein  40.26 
 
 
99 aa  62.4  0.000000002  Burkholderia thailandensis E264  Bacteria  normal  0.0227527  n/a   
 
 
-
 
NC_008391  Bamb_3595  histone family protein nucleoid-structuring protein H-NS  36.96 
 
 
95 aa  62.8  0.000000002  Burkholderia ambifaria AMMD  Bacteria  normal  0.137974  normal 
 
 
-
 
NC_010552  BamMC406_4070  histone family protein nucleoid-structuring protein H-NS  36.96 
 
 
95 aa  62  0.000000003  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.000676326  normal 
 
 
-
 
NC_010515  Bcenmc03_4282  histone family protein nucleoid-structuring protein H-NS  37.62 
 
 
100 aa  61.6  0.000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0105949  normal  0.0174683 
 
 
-
 
NC_006348  BMA2867  H-NS histone family protein  36.46 
 
 
98 aa  61.2  0.000000004  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0084  H-NS histone family protein  36.46 
 
 
98 aa  61.2  0.000000004  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3109  H-NS histone family protein  36.46 
 
 
98 aa  61.2  0.000000004  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3862  H-NS histone family protein  36.46 
 
 
98 aa  61.2  0.000000004  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1677  H-NS histone family protein  36.46 
 
 
98 aa  61.2  0.000000004  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3442  H-NS histone family protein  36.46 
 
 
98 aa  61.2  0.000000004  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3943  H-NS histone family protein  36.46 
 
 
98 aa  61.2  0.000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3717  histone family protein nucleoid-structuring protein H-NS  33.33 
 
 
136 aa  60.8  0.000000005  Delftia acidovorans SPH-1  Bacteria  normal  0.989758  hitchhiker  0.00118334 
 
 
-
 
NC_010551  BamMC406_0175  histone family protein nucleoid-structuring protein H-NS  38.14 
 
 
98 aa  60.5  0.000000007  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0162  histone family protein nucleoid-structuring protein H-NS  38.14 
 
 
98 aa  60.5  0.000000007  Burkholderia ambifaria AMMD  Bacteria  normal  0.121985  n/a   
 
 
-
 
NC_010002  Daci_4465  histone family protein nucleoid-structuring protein H-NS  42.7 
 
 
92 aa  60.5  0.000000008  Delftia acidovorans SPH-1  Bacteria  normal  0.695514  normal  0.126063 
 
 
-
 
NC_008392  Bamb_6191  histone family protein nucleoid-structuring protein H-NS  37.11 
 
 
102 aa  60.1  0.00000001  Burkholderia ambifaria AMMD  Bacteria  normal  0.299615  normal 
 
 
-
 
NC_010557  BamMC406_5922  histone family protein nucleoid-structuring protein H-NS  37.11 
 
 
102 aa  59.3  0.00000002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.997127  normal  0.678214 
 
 
-
 
NC_007651  BTH_I3189  H-NS histone family protein  34.38 
 
 
98 aa  58.5  0.00000003  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2714  DNA-binding protein BprA  34.04 
 
 
111 aa  57.8  0.00000005  Burkholderia thailandensis E264  Bacteria  normal  0.344106  n/a   
 
 
-
 
NC_010002  Daci_1968  histone family protein nucleoid-structuring protein H-NS  38.2 
 
 
93 aa  57.8  0.00000005  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7383  histone-like nucleoid-structuring protein H-NS  36.08 
 
 
102 aa  57.4  0.00000006  Burkholderia sp. 383  Bacteria  normal  normal  0.907507 
 
 
-
 
NC_010622  Bphy_2981  histone family protein nucleoid-structuring protein H-NS  35.35 
 
 
100 aa  57.4  0.00000007  Burkholderia phymatum STM815  Bacteria  normal  0.207499  decreased coverage  0.0000000417224 
 
 
-
 
NC_007434  BURPS1710b_2220  H-NS histone family protein  37.5 
 
 
102 aa  57  0.00000008  Burkholderia pseudomallei 1710b  Bacteria  normal  0.999721  n/a   
 
 
-
 
NC_010512  Bcenmc03_6929  histone family protein nucleoid-structuring protein H-NS  34.04 
 
 
99 aa  57  0.00000009  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.599841  normal 
 
 
-
 
NC_006349  BMAA0068  H-NS histone family protein  35.35 
 
 
99 aa  56.2  0.0000001  Burkholderia mallei ATCC 23344  Bacteria  unclonable  0.00000000181219  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0079  H-NS histone family protein  35.35 
 
 
108 aa  56.2  0.0000001  Burkholderia pseudomallei 1106a  Bacteria  unclonable  0.0000151227  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1570  H-NS histone family protein  35.35 
 
 
173 aa  56.2  0.0000001  Burkholderia pseudomallei 1710b  Bacteria  unclonable  0.000000000103893  n/a   
 
 
-
 
NC_009075  BURPS668_A0098  H-NS histone family protein  35.35 
 
 
108 aa  56.2  0.0000001  Burkholderia pseudomallei 668  Bacteria  unclonable  0.00000000000000405362  n/a   
 
 
-
 
NC_010084  Bmul_0158  histone family protein nucleoid-structuring protein H-NS  31.96 
 
 
98 aa  56.2  0.0000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_6084  histone family protein nucleoid-structuring protein H-NS  40 
 
 
99 aa  56.2  0.0000001  Burkholderia ambifaria MC40-6  Bacteria  normal  0.78955  normal 
 
 
-
 
NC_008392  Bamb_6382  histone family protein nucleoid-structuring protein H-NS  37.37 
 
 
99 aa  56.6  0.0000001  Burkholderia ambifaria AMMD  Bacteria  normal  0.193522  normal  0.0275568 
 
 
-
 
NC_008784  BMASAVP1_1225  H-NS histone family protein  35.35 
 
 
99 aa  56.2  0.0000001  Burkholderia mallei SAVP1  Bacteria  decreased coverage  0.000000000000571024  n/a   
 
 
-
 
NC_008835  BMA10229_1506  H-NS histone family protein  35.35 
 
 
108 aa  56.2  0.0000001  Burkholderia mallei NCTC 10229  Bacteria  unclonable  0.00000000000000220305  n/a   
 
 
-
 
NC_007336  Reut_C6005  histone-like nucleoid-structuring protein H-NS  35 
 
 
103 aa  55.5  0.0000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1065  histone family protein nucleoid-structuring protein H-NS  28.57 
 
 
98 aa  55.8  0.0000002  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0843  DNA-binding protein BprA  36.84 
 
 
96 aa  55.8  0.0000002  Burkholderia thailandensis E264  Bacteria  normal  0.277711  n/a   
 
 
-
 
NC_010002  Daci_3476  histone family protein nucleoid-structuring protein H-NS  30.93 
 
 
97 aa  55.8  0.0000002  Delftia acidovorans SPH-1  Bacteria  normal  0.634664  normal 
 
 
-
 
NC_011662  Tmz1t_2060  histone family protein nucleoid-structuring protein H-NS  33.33 
 
 
91 aa  55.8  0.0000002  Thauera sp. MZ1T  Bacteria  normal  0.0796579  n/a   
 
 
-
 
NC_008782  Ajs_1144  histone family protein nucleoid-structuring protein H-NS  28.57 
 
 
98 aa  55.8  0.0000002  Acidovorax sp. JS42  Bacteria  normal  0.439674  normal  0.582774 
 
 
-
 
NC_007348  Reut_B5596  nucleoid protein H-NS  32.65 
 
 
102 aa  55.1  0.0000003  Ralstonia eutropha JMP134  Bacteria  normal  0.16143  n/a   
 
 
-
 
NC_008758  Pnap_4578  histone family protein nucleoid-structuring protein H-NS  36.52 
 
 
121 aa  55.1  0.0000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0116  histone family protein nucleoid-structuring protein H-NS  35.35 
 
 
100 aa  55.5  0.0000003  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1136  histone family protein nucleoid-structuring protein H-NS  33.33 
 
 
104 aa  54.7  0.0000004  Thauera sp. MZ1T  Bacteria  hitchhiker  0.00265311  n/a   
 
 
-
 
NC_003296  RS00711  putative HNS-like transcription regulator protein  39.13 
 
 
96 aa  54.3  0.0000005  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.0000172984  normal 
 
 
-
 
NC_010087  Bmul_5767  histone family protein nucleoid-structuring protein H-NS  34.02 
 
 
99 aa  54.3  0.0000005  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008760  Pnap_4730  histone family protein nucleoid-structuring protein H-NS  36.52 
 
 
121 aa  54.3  0.0000006  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.167387  normal 
 
 
-
 
NC_008781  Pnap_3939  histone-like nucleoid-structuring protein H-NS  31.63 
 
 
99 aa  53.9  0.0000007  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0681504  hitchhiker  0.000514453 
 
 
-
 
NC_007434  BURPS1710b_0048  H-NS histone family protein  36.73 
 
 
125 aa  53.5  0.0000008  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2905  H-NS histone family protein  37.5 
 
 
97 aa  53.5  0.0000009  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3909  H-NS histone family protein  37.5 
 
 
97 aa  53.5  0.0000009  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1636  H-NS histone family protein  37.5 
 
 
97 aa  53.5  0.0000009  Burkholderia mallei NCTC 10229  Bacteria  normal  0.741416  n/a   
 
 
-
 
NC_007651  BTH_I3155  H-NS histone family protein  37.5 
 
 
97 aa  53.5  0.0000009  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2965  H-NS histone family protein  37.5 
 
 
97 aa  53.5  0.0000009  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3827  H-NS histone family protein  37.5 
 
 
97 aa  53.5  0.0000009  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3404  H-NS histone family protein  37.5 
 
 
97 aa  53.5  0.0000009  Burkholderia mallei SAVP1  Bacteria  normal  0.237819  n/a   
 
 
-
 
NC_010086  Bmul_3806  histone family protein nucleoid-structuring protein H-NS  34.31 
 
 
100 aa  53.5  0.000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0101066  hitchhiker  0.00273603 
 
 
-
 
NC_010002  Daci_4071  histone family protein nucleoid-structuring protein H-NS  34.88 
 
 
95 aa  52  0.000002  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.0737815 
 
 
-
 
NC_006349  BMAA1529  DNA-binding protein BprA  34.74 
 
 
96 aa  52.8  0.000002  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010087  Bmul_5655  histone family protein nucleoid-structuring protein H-NS  40.79 
 
 
128 aa  52.4  0.000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A0569  HNS-like transcription regulator protein  34.74 
 
 
100 aa  52.4  0.000002  Burkholderia pseudomallei 1710b  Bacteria  normal  0.147609  n/a   
 
 
-
 
NC_010678  Rpic_4798  histone family protein nucleoid-structuring protein H-NS  38.04 
 
 
96 aa  52.8  0.000002  Ralstonia pickettii 12J  Bacteria  normal  0.272454  normal  0.166506 
 
 
-
 
NC_009075  BURPS668_A2160  DNA-binding protein BprA  34.74 
 
 
96 aa  52.8  0.000002  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2072  H-NS histone family protein  34.74 
 
 
96 aa  52.8  0.000002  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_3721  histone family protein nucleoid-structuring protein H-NS  38.04 
 
 
96 aa  52.8  0.000002  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.00112888  normal  0.513312 
 
 
-
 
NC_009079  BMA10247_A0755  H-NS histone family protein  34.74 
 
 
100 aa  52.4  0.000002  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0220992  n/a   
 
 
-
 
NC_008752  Aave_1150  histone family protein nucleoid-structuring protein H-NS  29.17 
 
 
99 aa  52.8  0.000002  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2580  histone family protein nucleoid-structuring protein H-NS  32.26 
 
 
119 aa  52.4  0.000002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.122678  normal  0.024514 
 
 
-
 
NC_008835  BMA10229_2075  DNA-binding protein BprA  34.74 
 
 
100 aa  52.4  0.000002  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0585602  n/a   
 
 
-
 
NC_007509  Bcep18194_C6596  histone-like nucleoid-structuring protein H-NS  34.04 
 
 
96 aa  52  0.000003  Burkholderia sp. 383  Bacteria  normal  0.540075  normal 
 
 
-
 
NC_007510  Bcep18194_A3384  histone-like nucleoid-structuring protein H-NS  37.5 
 
 
97 aa  52  0.000003  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0190  histone family protein nucleoid-structuring protein H-NS  37.5 
 
 
97 aa  51.6  0.000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.317548  hitchhiker  0.0000000190695 
 
 
-
 
NC_007511  Bcep18194_B1226  histone-like nucleoid-structuring protein H-NS  33.33 
 
 
114 aa  51.2  0.000004  Burkholderia sp. 383  Bacteria  normal  0.204671  normal 
 
 
-
 
NC_010515  Bcenmc03_5567  histone family protein nucleoid-structuring protein H-NS  38.89 
 
 
99 aa  51.6  0.000004  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.000568054  normal  0.0551965 
 
 
-
 
NC_010551  BamMC406_0209  histone family protein nucleoid-structuring protein H-NS  36.46 
 
 
97 aa  51.6  0.000004  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.726678 
 
 
-
 
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