18 homologs were found in PanDaTox collection
for query gene VC0395_A1388 on replicon NC_009457
Organism: Vibrio cholerae O395



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009457  VC0395_A1388  hypothetical protein  100 
 
 
346 aa  703    Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2697  hypothetical protein  67.55 
 
 
553 aa  462  1e-129  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007494  RSP_3355  putative tape measure protein  44.53 
 
 
775 aa  220  3e-56  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0680  hypothetical protein  37.42 
 
 
1308 aa  194  2e-48  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_2103  phage tape measure protein  37.12 
 
 
1307 aa  191  1e-47  Shewanella baltica OS185  Bacteria  normal  0.56214  n/a   
 
 
-
 
NC_009997  Sbal195_2149  phage tape measure protein  36.09 
 
 
1308 aa  187  3e-46  Shewanella baltica OS195  Bacteria  normal  0.843593  normal 
 
 
-
 
NC_008345  Sfri_1684  phage tape measure protein  40.28 
 
 
1292 aa  165  8e-40  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0765  phage tail tape measure protein, TP901 family  37 
 
 
1306 aa  157  3e-37  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0789  phage tape measure protein  36.56 
 
 
1306 aa  154  2e-36  Shewanella baltica OS223  Bacteria  normal  normal  0.204936 
 
 
-
 
NC_010158  YpAngola_0089  putative phage tail tape measure protein  28.16 
 
 
1521 aa  95.1  2e-18  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4676  hypothetical protein  27.14 
 
 
1609 aa  70.5  0.00000000004  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0691  phage tail tape measure family protein  47.14 
 
 
583 aa  67.8  0.0000000003  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0746  phage tail tape measure family protein  47.14 
 
 
583 aa  67.8  0.0000000003  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4807  phage tape measure protein  26.49 
 
 
694 aa  55.1  0.000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_014149  Plim_4263  phage tape measure protein  26.63 
 
 
574 aa  54.7  0.000002  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1000  phage tape measure protein  23.27 
 
 
991 aa  47.8  0.0003  Paracoccus denitrificans PD1222  Bacteria  normal  0.734571  normal 
 
 
-
 
NC_013517  Sterm_2826  hypothetical protein  24.23 
 
 
893 aa  44.3  0.003  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1263  phage tape measure protein  22.19 
 
 
852 aa  43.1  0.007  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.00378287  n/a   
 
 
-
 
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