Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0746 |
Symbol | |
ID | 5135810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 772945 |
End bp | 774696 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640532204 |
Product | phage tail tape measure family protein |
Protein accession | YP_001216696 |
Protein GI | 147675502 |
COG category | [R] General function prediction only |
COG ID | [COG3941] Mu-like prophage protein |
TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCAGC AACTTAAAAC AGACATCATC CTCAACCTAG CGGGTAATCT CGCGGCCAAA GCCAAGCAAT ATGGCGCATC AATGAGCGAC TTCGCACGCA AGAATGAGCG TGCCATGACT CTACTCAAAA CCTCAGCAGA TGCCGCAGGT CGCGGCATTG ACTCACTCGG TAACCGCTAT GTTGGCCTTG TTACTGCTGT TGCGACAGGC GCGGCCGTGC GTAATGTGGC GGCGCTCGAA GCGCAAATGG TGCGCATTGG TACTAACGCC AAGCTCTCTA GTGATCAAGT CGCCCTGCTC ACCAAGCAGC TTGAAGCGAT GTCAGTGCAA AAGGATATCC GCATTGGTAC TGACCAGTTG GCCGCAGGCG TGGATGAGCT GCTGGGGAAA ACGGGTGACT TTGAATTCGT GCAAGAGAAC CTTGAGAACA TGGGTTTGTT CATGCAAGCC TTCGGGGCAG ATGCGCGTTC AACAGGTGCG CTGTTTGCCC AGTTCCGTGA GAAAGGGATC CGAGATGCCA AAGACGTGAT GAACACCATC GATGAGCTGT ATGGTCAGTT CGCGATCGGT AGTGTCAACG TCAAAGACTT GGCTGATATT TCCGAGCAGC TCTTTGCTAC TTACCAAGGC AAAGGGCCAG AAGCGATCTC TCAGATGTCT GCGCTCGTTC AGCTCTTTGC TAAGGCTAAA GGCAATGCAA ACGAATCGTT GACCTCAATT CAGGCCGTGT TCGCCACGTT CAGCGATAAA AAGAAAGTGG AGTTCCTGAA CCGTCAGGGC ATCGAAGTAT TCAAAAAAGG CACCAAAGAG CTGCGCGAGC CTGTCGAACT GCTCTTAGAG ATTTTGGATA AGGCCAAGAA TGACCCATTG AAATTGGGTG ATGTGTTTGA CCAAACCAGC TTGCAAGGTT TGGCCTCTCT CTACTCTCAA GAGAATAAAG ATTTGCTGCG ATCCATGATT AGCGGCACCG CAGAAATGGG GGCGACACAG GAAGCCGCCG CCAAGAACGC TGCGACCCTG AATGCAGCCA CCACCGCATT GAATAACAGC TTCAATAAAT TTGCCAACGA ACGCTTGGCC GAGCCGATTC AAGAACTCGC GGACGCGATC AACTCAGTTG ATGATGAAAC CATTCAGAAC TGGCTCAAGT GGGCAGAAGC AGCTGGCTAT GGTGTGGGTT TGTTGTTAGC AGGTAAGAAA GCTGTAGATG CTTATCGATG GGTAAAAGGT GGTTCCGGCG GTTCAGGCGG TGCAGCAGGT GGCGGTTTCG CCGATTTAGG TGTAATGCCC GTGTACGTGG TGAACATGCC AGGTGGTGGC ATGGGTGGAG CTGCTGGCGG ATTACCAGAA GGTATCGGCG GAGATGGTAA GCCAACAGGT AAGCCAAGTG CCAAGTCAAA GTGGCCGTCT ATTTTTTCAA AGCAGAATCT CGCGGCCATC GGCACGATTG GTTATGCCAG CACCATGATC CCAGAGTGGT CTCCTATCGA TGTTCGCCGT GCATCAGAAG TGGATCGCAC AGGCTTGCCG GAAAGCTTTG TTCCTGCACC TGGATTGCTC GACGTGTGGG ATGAACTCAA AGGCCTATTC TCTGGCTCAA GTAATGGTTC AATGGCTGGC AATAGTTACA TGGCAGGCCA AACGGGTGGC GAGATGAAAT TAAAAGTGGA AGTGTCTGAT GACCGTGTAA AAGTCACGCC TACTTACCTG CCGAAAGGTT TCACTATTGA CCCAGATATG GGCGCAAATT AA
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Protein sequence | MAQQLKTDII LNLAGNLAAK AKQYGASMSD FARKNERAMT LLKTSADAAG RGIDSLGNRY VGLVTAVATG AAVRNVAALE AQMVRIGTNA KLSSDQVALL TKQLEAMSVQ KDIRIGTDQL AAGVDELLGK TGDFEFVQEN LENMGLFMQA FGADARSTGA LFAQFREKGI RDAKDVMNTI DELYGQFAIG SVNVKDLADI SEQLFATYQG KGPEAISQMS ALVQLFAKAK GNANESLTSI QAVFATFSDK KKVEFLNRQG IEVFKKGTKE LREPVELLLE ILDKAKNDPL KLGDVFDQTS LQGLASLYSQ ENKDLLRSMI SGTAEMGATQ EAAAKNAATL NAATTALNNS FNKFANERLA EPIQELADAI NSVDDETIQN WLKWAEAAGY GVGLLLAGKK AVDAYRWVKG GSGGSGGAAG GGFADLGVMP VYVVNMPGGG MGGAAGGLPE GIGGDGKPTG KPSAKSKWPS IFSKQNLAAI GTIGYASTMI PEWSPIDVRR ASEVDRTGLP ESFVPAPGLL DVWDELKGLF SGSSNGSMAG NSYMAGQTGG EMKLKVEVSD DRVKVTPTYL PKGFTIDPDM GAN
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