| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4676 |
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| Symbol | |
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| ID | 5750267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5129112 |
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| End bp | 5133941 |
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| Gene Length | 4830 bp |
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| Protein Length | 1609 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641299780 |
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| Product | hypothetical protein |
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| Protein accession | YP_001565690 |
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| Protein GI | 160900108 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3941] Mu-like prophage protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGCT CCGGCAACAT CAACTACCTG CGGTTCCTGA TCACGGGCGA CAGCTCGCAG
CTGCAGGCCG AGGTCGAGAA GTCCAAGCGC ACCGTCACGG GCATGGTCGA TGGCATGGCC
GGCTCGCTCG GGCGCCTGGG CACGCTGCTC GGTGGCGTTT TTGCCGGCGT GTCCGTCACG
GCGTTCGTCG GCAAGCTGGT ATCGGTGCAG CGCGAATTCG ACGTGCTCAA CAGCTCGCTG
GTCACGGTCA CGGGCAGTGC CCAGGCGGCT GGCCGGGAGA TGGCCTGGAT CAAGACCTTT
GCCAAGGACA CGCCCTATGG GCTGGCCCAG GCCACCGAGG CTTTCGTGAA GATGAAGGCC
TTGGGCCTTG ATCCCACCCA GGCCAAGCTC ACCAGCTTCG GCAATACGGC CGCTGGCATG
GGCAAGAGCC TCATGCAGAT GATCGAGGCC GTGGCGGATG CGGCCACGGG CGAATTCGAG
CGCCTGAAGG AATTCGGCAT CAAGGCGTCC AAGCAGGGCG ACATGGTGGC GTTCACCTTC
CAGGGCGTCA CGACCCGGGT GAAGAACTCG GCCAAGGACA TCACCGACTA CCTGGAGAAC
ATCGGCAACA CCGCCTTCGG CGGCGCCATG GAGCAGCGTG CCAAGACCCT GGACGGCGCC
ATTGCTGCCC TGGGTGACTC CTGGGACGAA CTATTCCGCA CCATCAACGA GAGCACGGGT
TTTTCGGAGA AGGCTGCCGG GGGCGTGCGC CTGGTCACGG ACGCCATCGA TGGGCTCGGC
AAGATGGTCG AGAACCACCA GGGCGTGGTG ATGACCTTCC TGGGTGCTGC TGGCGGCGCG
GCCGCAGCGG CGGGCCTGGT GGCCGTGGGC GGGGCCATCG GCGTGGTCAA GGGGGCCATC
GTCACGCTGG CCGCCGTGCT GGCCGCGAAT CCCGTGACGC TTGCGCTGCT GGGTGTTGGC
GTGGTGGCTG GTGCCGGCGT GGCGGCGGTC AACATGTACG CCAAGACGGC TGCGGGCATC
GAGGACGCGA TTGCCACCTT GCGCGTCGAG AACGAGCGTT CCGAGGCTGC CATGGCGCGC
GCCGTGGCGG GTGGCCGCAC GGCTGGCGCG GACAACATCG CCAAGACCAT CGAGGCACGC
AAGGACCAGA TTGCCAAGCT GCGGGCCGAG CTGGACATGC TCAACGCCAG CAGCAAGGGC
GCGGGCGGCG GGCGTGGCTC CGTCAATCCT CCCACCGCTG CAGAGGCTGC TGCGAAGAAG
GCCCAGGAAG ATGCGGACGC CGAGCAGGCT CTGCTGGAGA TCCGCCAGAA GCTCTACGGC
GTCAACAAGG ACTACCTGCC GCAGCTGCAA AAGCTTAACG AGCTGCGCCA GGCCGGCCGC
ATCACAGAGG CTGCCTATGT CGAGCTGGTC AGCAAGCTGG CCAAGGAAAA TTACAAGGAA
GACGAGTCGG CCAAGGCCCG TGCCAGCTCG GCCAAGCAGC TGCACACGGC CTATGGCAAC
CTGGTCGATT CCATCGAGGA AAAGATTGCA GCCCAGCGCC TGGAGATCTC CGGCGGGGAG
AAGCTGGGCG AGGCCGACAA GCTGCGCATC AAGTATTCGC AGGACCTGCT GGGCTCGCTC
AAGGGGCTCA ATGCTGGAGA GCGCGCCAAC ATCGAAGCCA AGCTCAAGAC CCTCAAGACG
CTGGAGAAGG AAAACGAGGC CCGGCAGAAG GCCCTGAAGC TGGCCGAGGA GGAACGCAAG
TACCGCCAGG AGTGGATGAC CACACAGGGC AAGACAGTCG AGGAGCTGAC GGCCAGCAAC
CAGGCGCTGC GCGACGAGAT CGAGCTGATC GGCCTGAGCG CCGAGCAGCA GCGCGTGGTC
ATCGAGCAGC GGCAGATGGC CATCATCCTG AGCAAGGAGC AGCAGCTGGC CGAGATGGAG
CGCTCGGCTG CGCTCACCGG CACCATGACC ATGGAGCACG CGCTGCTCCA GCAGGAAATC
GAGCTGCTGC GCGAGCGCCT GGGTCTGACC TCGGTGAAGG CTTCGCGCGA AGCCTCAGCC
GACGCGGCAA AGGCCAGCAC CTCGGAGTGG CAGAAGGGTG TGGACCAGAT CGGGCAGAGC
CTGGCTGACC AGTTGATGCA GGGCGGTCAA TCATTCGGTC AATACCTGAA GAATCTGGCG
CGCACGCTGG TGTTCAAGCC GTTGATCCAG GCCACGGTCC AGATCGCTGG CGGTGCCCTG
GGCAGTTTGT TTGGCGCACC CGCTGCTGCT GGCCAGAGTG GTGGTGCAGG CATGGGCATG
CTCAACAACC TCGGCGCGCT GGGTGCAGGT GCCCAGGCAA TGTGGGGCTT CCTGCCGGGC
GCCTCGGCTG CCAGCCTTGC TGGTGCCAAT GCCGTTGGCA TGGTTGGCGG TGATGCCCTC
GGTGCCTTGA TCGCAGGCAA TGGCAGCTGG GCCGGTGTCG GCAGCAGCTT CGGCTCGCTG
ATGTCTGGCA TCGGCGCTGC GATGCCCTGG ATTGCGGGTG CCATCGCCAT TTTCTCGCTG
CTCAAGGGCG GATTATTTGG TTCGCGCGGT GCCAACCACG TTGGCGCGGC CTACAGCACC
ACGGGCGCGG GCAATGACAA GGCCGCCGAG ATGCTGTTCG ATCGTGCGGG CGGTGACTGG
TATGACGACC TGACCAAGCG CCATAACGCT GATCTTGAGA AGCAACTTGG CAAGACCGTG
GATTCGCTGT CCGATGTCTA CAAGCGTCTC GCGCGATATG CCGGTGACAG CGCCAAGCAG
ATCGATATCG TCGCGGGCTT TGCGTCGAAT CCCAAGTACG ACGACGAGGA TTCCTACGGC
TACTTCAAGC TGATCGACAA GGTGACCGGC GAGGTCCTGA GCAGCTACAC CAAGCGCGAT
GGCGCGCTTG GCACGGACCC CACCAAGGCC TATGCCCAGT TCATTGCGGA CATGGGCGGT
GCCCTGATCG AGCAGTTGAA AAAGGCTGAT ATCCCCAGCT GGATGCGCAA TGTCTTCGAT
GACATGGGCG AAGACATCAC GCTGGAGAGC TTCAACGCTG CTATGCAGAC CGTGGAGCTG
ACGGGCGCGG CCATTGAGGG CTGGACCCGC AACATCACCA ATTTCGGCAA GCTGGGTGAC
GAAGCCATTG CCAAGCTCAT CAAGAGCGCG GGCGGCATCC AGGACCTGAT CGCGGGCATG
GATGCGTTCT ACACCAGCTT CTACAGTGAG CGCGAGCGCA TCGAGAACGC GGCCAAGGCC
GTGGACAAGG CGCTGAAGGA TCTCAAGATC GACATCGATC CCCGCATGGG CCAGGACGCC
AAGGCCAAGT TTCGCAAGCT CATCGAGGAC GCCATGGCGG CCGGCGACGT GGAGCTTCTG
GCCAAGCTCA TCCCGCTGGC CAAGGAATTC GGCGCCGTGG CCGATGCCGC TGGCCAGGTG
CTGGACACGC TCAAGAATGA GCGCCGGCAG TTGGAAGCCG AGTATCTGCG CGCCACGGGT
CAAACCGACA AGTACCGCGA GGCCCTGCGC AAGCTGGCCA CCGAAGGCAT GAGCGAAGCG
GAGAAGGCTG CATGGGACTA CAACCAGGCC CTGCGCGAGG AGATCGCGCG CCTGGACCAG
CGCACGGATC TGGAGCGCAG ACTGCTGGAA CTGCAGGGCA ACACTGCCGA GCTGCGCAAG
CGCGAGCTGG CTGCGCTGGA CCCCAGCAAT CGGGCGCTGC AGGAGCGCAT ATGGGCCATC
GAGGACGAGA AGGCCGCGCA GTCTGCTGCC TATGACATGT TCCGGCGTGC GGTGGACCGC
GACCGGGAGG AACTGCAGCA GCGCGTATCC GTGGTCCAGG AGACCATCAA CGCCATCGCC
TCGTCGGTGG ACGTTCTCAA GGGCGCTGCT CAGGAGCTGT ATGGCACCGT CGATTCAACG
GCCCAGCTCG CGGCAGTCCG CGGGATGGTC TACATCGAGC AGGCTCTGGA TGGGGTGAGG
GCGGGGCGCA AGCTCTCCGA ATACACCGAC ATCGGCGGGG CCGTGCAAGC CACCCGTGCT
GGCCTGGCGT CGGGCGTGTA TGCCACGGAC TTCGAGCGCC GCCGCGATGC GCTGGTGTGG
GCTGGCAAGT TCTCCGAGCT GGGTGACCTG GGCGAGATCC AGTTGAGCGT GGAGGAGCGC
TCGCTCAAGG CGCTGCAGTC CCAGCTCGAA TCCCTGGATA CGCTGGCCAA GCGAGCTGAT
GACCTGGTCA ACGGCACTGC GGCGCTCACT GGCACGGTGG ACGAGCATTT CAACAAGCTC
ATGGCTTTCT TGAATCCGGC CAAGCCCGAT CAGCCGGCTG CTGGCGGTGG TGGCAGCGGT
GGCGCTCAAT TGGGCGGGGG TGGCCCCAGT ACCGTAGGCA CGCCAGTCTT CGATCCTGAT
GCGGGCACGC TGACCTATCC GGACGGCAGC GTGGCGCACT TGACGCCGGA CGAGGTGTAT
TGGCACAAGC TGATTCGCGG GGATGACTGG AAGGGGCCAG TGTTTGCCAC AGGGGCAGCT
TTTTCCAGCG GCGTGGTATC GCGGCCCACC GTTTTTGACA TGGGCCTGAT GGGTGAGGCT
GGGCCGGAAG GCATCCTGCC TTTGGCCAAT GTCGGCGGCA GGCTTGGCGT GTATGCCGCC
ACCGGCCCAG GCAGCGATGA GCTGACACAG GCGCTGCTGG CAGAGATCAG GGCCATGCGC
GCTGAGCTGT CGGAGCTGCG GCAGTCATCC GCCCAGACGG CGCGGAACAC GGCCGGTGCA
CCGCAACTGG TCGAGCAGTT TGACCAGGTC AGTGGTGGTG GCCAGCGCCT GCGCGTGAGC
GCACCTGCGG CAGGGAAGGT GACGGCATGA
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| Protein sequence | MIGSGNINYL RFLITGDSSQ LQAEVEKSKR TVTGMVDGMA GSLGRLGTLL GGVFAGVSVT
AFVGKLVSVQ REFDVLNSSL VTVTGSAQAA GREMAWIKTF AKDTPYGLAQ ATEAFVKMKA
LGLDPTQAKL TSFGNTAAGM GKSLMQMIEA VADAATGEFE RLKEFGIKAS KQGDMVAFTF
QGVTTRVKNS AKDITDYLEN IGNTAFGGAM EQRAKTLDGA IAALGDSWDE LFRTINESTG
FSEKAAGGVR LVTDAIDGLG KMVENHQGVV MTFLGAAGGA AAAAGLVAVG GAIGVVKGAI
VTLAAVLAAN PVTLALLGVG VVAGAGVAAV NMYAKTAAGI EDAIATLRVE NERSEAAMAR
AVAGGRTAGA DNIAKTIEAR KDQIAKLRAE LDMLNASSKG AGGGRGSVNP PTAAEAAAKK
AQEDADAEQA LLEIRQKLYG VNKDYLPQLQ KLNELRQAGR ITEAAYVELV SKLAKENYKE
DESAKARASS AKQLHTAYGN LVDSIEEKIA AQRLEISGGE KLGEADKLRI KYSQDLLGSL
KGLNAGERAN IEAKLKTLKT LEKENEARQK ALKLAEEERK YRQEWMTTQG KTVEELTASN
QALRDEIELI GLSAEQQRVV IEQRQMAIIL SKEQQLAEME RSAALTGTMT MEHALLQQEI
ELLRERLGLT SVKASREASA DAAKASTSEW QKGVDQIGQS LADQLMQGGQ SFGQYLKNLA
RTLVFKPLIQ ATVQIAGGAL GSLFGAPAAA GQSGGAGMGM LNNLGALGAG AQAMWGFLPG
ASAASLAGAN AVGMVGGDAL GALIAGNGSW AGVGSSFGSL MSGIGAAMPW IAGAIAIFSL
LKGGLFGSRG ANHVGAAYST TGAGNDKAAE MLFDRAGGDW YDDLTKRHNA DLEKQLGKTV
DSLSDVYKRL ARYAGDSAKQ IDIVAGFASN PKYDDEDSYG YFKLIDKVTG EVLSSYTKRD
GALGTDPTKA YAQFIADMGG ALIEQLKKAD IPSWMRNVFD DMGEDITLES FNAAMQTVEL
TGAAIEGWTR NITNFGKLGD EAIAKLIKSA GGIQDLIAGM DAFYTSFYSE RERIENAAKA
VDKALKDLKI DIDPRMGQDA KAKFRKLIED AMAAGDVELL AKLIPLAKEF GAVADAAGQV
LDTLKNERRQ LEAEYLRATG QTDKYREALR KLATEGMSEA EKAAWDYNQA LREEIARLDQ
RTDLERRLLE LQGNTAELRK RELAALDPSN RALQERIWAI EDEKAAQSAA YDMFRRAVDR
DREELQQRVS VVQETINAIA SSVDVLKGAA QELYGTVDST AQLAAVRGMV YIEQALDGVR
AGRKLSEYTD IGGAVQATRA GLASGVYATD FERRRDALVW AGKFSELGDL GEIQLSVEER
SLKALQSQLE SLDTLAKRAD DLVNGTAALT GTVDEHFNKL MAFLNPAKPD QPAAGGGGSG
GAQLGGGGPS TVGTPVFDPD AGTLTYPDGS VAHLTPDEVY WHKLIRGDDW KGPVFATGAA
FSSGVVSRPT VFDMGLMGEA GPEGILPLAN VGGRLGVYAA TGPGSDELTQ ALLAEIRAMR
AELSELRQSS AQTARNTAGA PQLVEQFDQV SGGGQRLRVS APAAGKVTA
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