| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0680 |
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| Symbol | |
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| ID | 1168541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 696621 |
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| End bp | 700547 |
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| Gene Length | 3927 bp |
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| Protein Length | 1308 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637342666 |
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| Product | hypothetical protein |
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| Protein accession | NP_716313 |
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| Protein GI | 24372271 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3941] Mu-like prophage protein |
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| TIGRFAM ID | [TIGR02675] tape measure domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATA AAACCTTAGA ACTCGCCCTG CGGATCGTGG CCGAAGCCAC GGGCAAGCAG
CATATTGCCG CCTTGGTCGA TGAGCTTAAG CGCATCGGGG CCGAGTCGGA TGCGGCGAAT
CCTAAGACAC AAGCCTTAGC CGATGAAATT GATAGCGTTA GCGACGCCAG CCAAGCGGGC
GCGAATCAAG TTGATGAACT TAAAAACAGC CTTGATCCCT TAAGTAATCA GCTCGACCAA
GTAGCCCAAA GCGGCCGCAA TACTAGCAAC CAAGCAGAGC AGCTCACTAA CGAGCTTAAG
CCCTTAGCCA CTGGGCTGAA CGATGTTGGC GATAGCAGCC AATCGACCAG CCAAAAGGCT
AATACCTTAG CCAATAAGCT CGATGAGCTG GCCAATCAGC AAGACCTAAT CAATACCTTT
AAGCGCTCCC GCAATGAGCT TGAGCAACAA GAGCTTGCGG TGACGGCTGC GGCATTAGCA
CTGCAGGACT TAAAGCAGCG TGCCAGCCAA ACCGACGCCC CCTTTGTGCA GCTGGCTCGC
TCCATCGATG TGGCCGAAAA AGAGCTGGAG CAAATGCAGC GCGAGTTGGC GCAGCAATCG
GCCAGCCACA CTAAGCTGCA AAATGCCTTA TCCAAATCGG GCATTGACTA TAACAACCTC
ACCACCGCAC AGCGCAAGTT AAGTAGCGAA TTTGACGGTA CTGGCCGCAA TGTCGATAAG
TTTGCTAATC AGTTAGATAA AGGCAATGCC AGTGCCCGCG ATCATGCTGC CAGCCTGCGT
GGTGTGATCA CCCAAGTGAC CGCCTTGGCG GGTGCCTATG TGGGCTTTGA TCGCGTAGCT
CAAGCAGTTA AAGACATCTT TGCAACCGGG GATCAATTCG AGCGCCTAGG TGTGCAGATG
AACGCCGTGA TGGGCGGATT TGAATCTGGC CGCCAAGCGA CAGCTTGGGT AAAGCAATTC
GCCATTGATG TGCCACTGCA ACTCAATGAA GTTAACCAAG CGTTTGTAAA AGCCAAAGCC
TTTGGCCTTG ACCCGATGAA CGGCACCATG AAGGCGATTG TGGATCAAGC CTTTAAACTC
GGTGGCGGGT TTCAAGAAGT CGAGGGGATC ACCTTGGCTT TGGGCCAAGC CTGGGCAAAA
CAGAAATTAC AGGGCGAGGA GATCCTGCAA CTGATTGAGC GCGGCGTTCC TGTGTGGGAC
ATGCTGGCGA AAGTCACGGG CAAGAATAGC CTCGAACTAG AGAAGTTAAG CAGCCAAGGT
AAGCTGGGGC GTGATGTTAT CCAAGCCCTT ATCGATGAGA TGGGCCGCGC AAGTAACGGC
AGTGCCGCCG CGCAAATGGC TTTGCTCAGT GGCCAAGTTT CCAACCTTAA AGATAACCTC
ACTAACTTTT ACGACCTAGT GGCTCAGTCC GGTGCACTTG ATTGGCTAAA AGGCCAGATC
AGTGAATTGA ATCTTGAGTT TGCAGCCATG GCAAGCGACG GCCGTTTAAG AGAATGGGCG
CAGCAAATCA GCGATACCAT CGTGAGCATT GGCTCAGCGG TGCAAGATGG CGCTGCCATG
CTGTACCACT TCCGTGATGA AATCGGGTTT GTGGCTAAGG CATTTTTAGC CTTAAAAGTT
GGTAGTTATT TTAGCCATGT GATCACGGGC GCTAATGCCG CTATTGGTGC AATGCGCTTG
TATACCGGAG CTATTGCAGG CACAACCGCC GCCAGTGAAA CCGCCACCTT AGCGGCAGGT
AAATTAAAAG CCGCCCTCGC TGCCGCCGCT AAGGCTGGGT TATACCTGGC ATTAATCAAT
GAACTGATTG AAGTGGCGCG GGTGTACCAA GAGCTGCTGA TCGCCGAAGA AGCTTTGGCT
AAATCCAAAC GTACAACAGC TGCTAGCGCA AAACAGTTGG CGTTTTCCCT TAAGGATTTA
AGCGAGCAAA CGGGCGTTGC CTTTACCACT ATGGCCGAGT TCAACCAGGC GGTGGATGAC
GGCAAGCTGA TTTATGACGA GGCCAGCGGT AAATGGAAGA ACGCCGCCAA AGCCATGGAG
CAAGTCAAGC AGGCTGCCGT TGAGGTAGTT GAGCCGATTA AGCTGACGGT CGATGAAGCG
CTGCGCCTGA CCTTAACCTT AAGCGATCAG GTTAAAACCC TTGATGATGT TAAAGGCGGT
ATGGGCGGAT TTATTCGCCA GATTGATGCG GCCTTAGAAC CTTTAAAAGC AGCGGGAACA
GAGTATGCGG GCCATGTAAA ACTGCTTACT GAGCTGCGGG CAAAATTTGA GGAGCAGCAA
AGCTACCTCG ATGCCACGGC CAAAGGGACG GCAGCGTTAG AGCAAGCCTA TAAGGACTTA
GGTATCACCA GCAGCCAAGC CCTGACGGAT GCGACCAACA AAGCCGAAAC GGCATTTAAC
TTAATCAGAG ACAACCGTGA ACCACTTGAG CAACAAAAGG ATGCATTTTT AGCCTGGGCA
AAAGCCGCGC TCACTGCTGC CGAAGCCACT GGTGCTGTGG TACCAGAATC CCTAAAGGCG
CAGGCGGCCA CCCTTGGACT CTCTAAAGAG TTAAATGATC TTACGGCCAA ACAGTACGGC
TATACGGACA GCACTAAGGA ACTCTCACCG GAACAGGCGA AGTTAAGCCG TGCCGTTGCC
GAAACCGAAG CGCGCTTAAA ACAATGCCGT GATGTGATGA ATAGCTCGAC GGTATCGAGC
AAAGAAAAAT CCAAAGCGCA ACAGGAACTC ATTAACCTGC AGGGCAAGCT GAGTGCGCAA
ACTCAGCAGC TTAGCGAAGT ACAAGCGCTT GAGGCTGCTA ACTATGAGCA GATCAAAAGC
AAGTATGCCG CCGTAAGTGA TGAAATGTTA AGGCTCGAAA AAGCCTATAA AGATGGCGGC
ATAACCGCTG AAGAGTATCT GCAACAAAAA GAACGCCTGG TGCAAGTGCT CAATGTACTG
CAACGCTTAA TGGGCGGCTT GCAAGACGGT GAGCAAGAGA CTGACGAACA AGTTAAAAAG
ACCACTAAAA CCTTAATTGA ACAACGCCAA GAGCTAGAGC AACTAGAGGA AACCACAGGC
CGCGCCACTG AGTATGTCAA CCTGTTTGCG GGGGCTTATG CTCACCTCAA TAAGCAATTT
AGCTTTAACC AAGATAGCAC CGAAAAGTTG AATGCTCGGC TCGATGAGCT GACCAAAAGC
ATTATGAACA ATATGCGGGT AAACACGGGC TTTTGGGGCG TGCTGGCACA GCTCAGTAAC
CAAGCCTTTA TCCGTGAAAA GCAGATCATT AATGAAACCT TGCTGACGCG TAAGTGGGCT
GAAGAGCTTG AAAGCTCGAC GATAACCCTT AGTCGGGTGA ATCAAATCAG TCGCGAGTCC
GGCTATTTAA TCCGTGAATT AGGTGATGAA GAACTCAAGC CGCTGCAGGC CGCCATTGAT
GCGACCCGCA ATCGGATTCT TGGCCTGCGT GACGATATCA ACGCCACCTT GGGCAGTCTC
AAAGATGAGA TGGATCAGCT CAATAATAAC CAAGCTGCTA TCGAGAAGCG CCGCTATGAG
CAGCAACAGG CCGAGCTTAA GGCGCAGCTC GATGCTGCCC GAACCGCCCA GGATAATGAG
TCCATTGCCA GTGCCCAAGA AGCCCTGCAA CTCAGTCAGC AAATCTACGC CACCAAACTC
AAACAAATCG AAGCCGAGGC GGCAGAACGT AACGCACGGG CTAAAGATAG CGTATCAAGC
AGCACCAACA CCGCGACTAA TTCCACGCGC AGCAATGCCA GCCAAGCGCC AGCGCCATCG
GTCAACAATC CAAACACTGG CGGCAGCGTG CAGGTCTATC GGCTAGAGCT AGTGATGCCC
TCCGGTAATG TGCTGAAGGC TGATTTATTG GATGAGTTTA AGCAGATGTT TTTACGCGAG
TTAGAGCAGA TTAAGGCGAC ATCATGA
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| Protein sequence | MADKTLELAL RIVAEATGKQ HIAALVDELK RIGAESDAAN PKTQALADEI DSVSDASQAG
ANQVDELKNS LDPLSNQLDQ VAQSGRNTSN QAEQLTNELK PLATGLNDVG DSSQSTSQKA
NTLANKLDEL ANQQDLINTF KRSRNELEQQ ELAVTAAALA LQDLKQRASQ TDAPFVQLAR
SIDVAEKELE QMQRELAQQS ASHTKLQNAL SKSGIDYNNL TTAQRKLSSE FDGTGRNVDK
FANQLDKGNA SARDHAASLR GVITQVTALA GAYVGFDRVA QAVKDIFATG DQFERLGVQM
NAVMGGFESG RQATAWVKQF AIDVPLQLNE VNQAFVKAKA FGLDPMNGTM KAIVDQAFKL
GGGFQEVEGI TLALGQAWAK QKLQGEEILQ LIERGVPVWD MLAKVTGKNS LELEKLSSQG
KLGRDVIQAL IDEMGRASNG SAAAQMALLS GQVSNLKDNL TNFYDLVAQS GALDWLKGQI
SELNLEFAAM ASDGRLREWA QQISDTIVSI GSAVQDGAAM LYHFRDEIGF VAKAFLALKV
GSYFSHVITG ANAAIGAMRL YTGAIAGTTA ASETATLAAG KLKAALAAAA KAGLYLALIN
ELIEVARVYQ ELLIAEEALA KSKRTTAASA KQLAFSLKDL SEQTGVAFTT MAEFNQAVDD
GKLIYDEASG KWKNAAKAME QVKQAAVEVV EPIKLTVDEA LRLTLTLSDQ VKTLDDVKGG
MGGFIRQIDA ALEPLKAAGT EYAGHVKLLT ELRAKFEEQQ SYLDATAKGT AALEQAYKDL
GITSSQALTD ATNKAETAFN LIRDNREPLE QQKDAFLAWA KAALTAAEAT GAVVPESLKA
QAATLGLSKE LNDLTAKQYG YTDSTKELSP EQAKLSRAVA ETEARLKQCR DVMNSSTVSS
KEKSKAQQEL INLQGKLSAQ TQQLSEVQAL EAANYEQIKS KYAAVSDEML RLEKAYKDGG
ITAEEYLQQK ERLVQVLNVL QRLMGGLQDG EQETDEQVKK TTKTLIEQRQ ELEQLEETTG
RATEYVNLFA GAYAHLNKQF SFNQDSTEKL NARLDELTKS IMNNMRVNTG FWGVLAQLSN
QAFIREKQII NETLLTRKWA EELESSTITL SRVNQISRES GYLIRELGDE ELKPLQAAID
ATRNRILGLR DDINATLGSL KDEMDQLNNN QAAIEKRRYE QQQAELKAQL DAARTAQDNE
SIASAQEALQ LSQQIYATKL KQIEAEAAER NARAKDSVSS STNTATNSTR SNASQAPAPS
VNNPNTGGSV QVYRLELVMP SGNVLKADLL DEFKQMFLRE LEQIKATS
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