15 homologs were found in PanDaTox collection
for query gene Sfri_1684 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008345  Sfri_1684  phage tape measure protein  100 
 
 		 1292 aa  2555    Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_0765  phage tail tape measure protein, TP901 family  58.96 
 
 		 1306 aa  1433    Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_0789  phage tape measure protein  58.75 
 
 		 1306 aa  1407    Shewanella baltica OS223  Bacteria  normal  1  normal  0.204936 
 
 
-
 
NC_007954  Sden_3243  Phage tail tape measure protein TP901, core region  55.52 
 
 		 1419 aa  281  5e-74  Shewanella denitrificans OS217  Bacteria  normal  0.948991  n/a   
 
 
-
 
NC_009665  Shew185_2103  phage tape measure protein  37.89 
 
 		 1307 aa  272  2.9999999999999997e-71  Shewanella baltica OS185  Bacteria  normal  0.56214  n/a   
 
 
-
 
NC_004347  SO_0680  hypothetical protein  36.73 
 
 		 1308 aa  269  2.9999999999999995e-70  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_3592  TP901 family phage tail tape measure protein  52.92 
 
 		 1426 aa  266  1e-69  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_0797  TP901 family phage tail tape measure protein  52.27 
 
 		 1426 aa  265  6e-69  Shewanella baltica OS195  Bacteria  normal  1  normal  0.274443 
 
 
-
 
NC_009997  Sbal195_2149  phage tape measure protein  37.37 
 
 		 1308 aa  263  1e-68  Shewanella baltica OS195  Bacteria  normal  0.843593  normal  1 
 
 
-
 
NC_009457  VC0395_A1388  hypothetical protein  40.28 
 
 		 346 aa  165  6e-39  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_2697  hypothetical protein  39.39 
 
 		 553 aa  161  9e-38  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007494  RSP_3355  putative tape measure protein  34.77 
 
 		 775 aa  155  5e-36  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010158  YpAngola_0089  putative phage tail tape measure protein  23.23 
 
 		 1521 aa  58.9  0.0000006  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011769  DvMF_1643  phage tape measure protein  28.66 
 
 		 938 aa  45.8  0.005  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_009801  EcE24377A_1404  hypothetical protein  23.36 
 
 		 710 aa  45.4  0.007  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
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