| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1388 |
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| Symbol | |
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| ID | 5137800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1491842 |
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| End bp | 1492882 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640532846 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217331 |
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| Protein GI | 147674028 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3941] Mu-like prophage protein |
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| TIGRFAM ID | [TIGR02675] tape measure domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAACA ATTTAAAAAC GGATATTGTT TTAAACCTCC AGGGTGATCT TGCCCAGAAA
GCGCGGTCGT ATAGCAAAGA AATGACAACG CTAGCAACAC GTTCAAAAGC TGCATTTAGC
ATGATTAGTT CATCAGCAAT AGCGGCTAGC AGAGGCATTG ACACTTTCGG TAATCGACTG
CTTTTTATTA CTGGTGCTGC TGCGGTTGGT TTTGAACGTA CATTCGTAAA AACTGCTGCT
GAATTTGAAC GTTACCAAAC GATGCTAAAT AAGCTTCAAG GCTCACCAGA AGCTGGAGCT
AAGGCGATGG CATGGATTGA AGAGTTCACA CAAAACACCC CTTACGCTAT CGATGAAGTA
ACACAGTCAT TTGTACGTCT AAAAGCCTTT GGTATTGATC CTATGGATGG GACTATGCAA
AGTATCGCCG ATCAAGCGGC AATGATTGGC GGTACAGCAG AAACAGTTGA AGGTATCGCT
ACAGCGTTAG GTCAAGCGTG GACTAAAGGA AAACTTCAAT CAGAAGAGGC TCTCCAACTA
CTAGAGCGAG GTGTTCCTGT TTGGGATTAC CTAATTAAAT CCAGCAAAGA ACTGGGAATG
AACAATGGCC GTGGATTTAC CAAAGAAGAG CTGGATGATA TGTCATCTAA GGGAAAGCTA
GGTAGGGATG CAATCAGGGC TTTAATTAAG CAAATGGGTA AAGAATCCGC TGGTGCAGCC
AAAGAGCAGA TGAATACATG GAATGGTATG ATCTCTAACA TGGGCGATCA CTGGAAGCTT
TTTCAAAAAG ATGTGATGGG AAGCGGAGCA TTCACAGTTC TAAAAGACCA ATTGGGTGAG
TTCTTGGGGA TGCTTGATGA AATGAAAAAG ACTGGCGAAT ACGACGAGTT TGTCGATAAA
GTCGGGCGTG ATCTTGTTGA GGCCTTTAAA TCAGCCGCTG CTGCTGCAAG AGAAATTAAA
GAGGTCGGTG AGGAACTATG GCCTGTGATT CGAGAGATTG GCTCAATGGC TTGTAGTGGC
ATAGTGAATT TGGTCACTTA G
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| Protein sequence | MANNLKTDIV LNLQGDLAQK ARSYSKEMTT LATRSKAAFS MISSSAIAAS RGIDTFGNRL
LFITGAAAVG FERTFVKTAA EFERYQTMLN KLQGSPEAGA KAMAWIEEFT QNTPYAIDEV
TQSFVRLKAF GIDPMDGTMQ SIADQAAMIG GTAETVEGIA TALGQAWTKG KLQSEEALQL
LERGVPVWDY LIKSSKELGM NNGRGFTKEE LDDMSSKGKL GRDAIRALIK QMGKESAGAA
KEQMNTWNGM ISNMGDHWKL FQKDVMGSGA FTVLKDQLGE FLGMLDEMKK TGEYDEFVDK
VGRDLVEAFK SAAAAAREIK EVGEELWPVI REIGSMACSG IVNLVT
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