16 homologs were found in PanDaTox collection
for query gene SO_0680 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004347  SO_0680  hypothetical protein  100 
 
 		 1308 aa  2623    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_2103  phage tape measure protein  89.68 
 
 		 1307 aa  2226    Shewanella baltica OS185  Bacteria  normal  0.56214  n/a   
 
 
-
 
NC_009997  Sbal195_2149  phage tape measure protein  90.44 
 
 		 1308 aa  2206    Shewanella baltica OS195  Bacteria  normal  0.843593  normal  1 
 
 
-
 
NC_009665  Shew185_0765  phage tail tape measure protein, TP901 family  38.74 
 
 		 1306 aa  285  4.0000000000000003e-75  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_0789  phage tape measure protein  39.91 
 
 		 1306 aa  283  1e-74  Shewanella baltica OS223  Bacteria  normal  1  normal  0.204936 
 
 
-
 
NC_008345  Sfri_1684  phage tape measure protein  39.36 
 
 		 1292 aa  267  1e-69  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A1388  hypothetical protein  37.42 
 
 		 346 aa  194  1e-47  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_007494  RSP_3355  putative tape measure protein  39.27 
 
 		 775 aa  189  4e-46  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_2697  hypothetical protein  42.36 
 
 		 553 aa  175  5.999999999999999e-42  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010158  YpAngola_0089  putative phage tail tape measure protein  27.53 
 
 		 1521 aa  73.6  0.00000000003  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_3592  TP901 family phage tail tape measure protein  23.69 
 
 		 1426 aa  69.7  0.0000000003  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_0797  TP901 family phage tail tape measure protein  23.69 
 
 		 1426 aa  70.1  0.0000000003  Shewanella baltica OS195  Bacteria  normal  1  normal  0.274443 
 
 
-
 
NC_014149  Plim_4263  phage tape measure protein  27.07 
 
 		 574 aa  54.3  0.00001  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_2488  phage tape measure protein  31.73 
 
 		 611 aa  50.1  0.0002  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_4676  hypothetical protein  31.25 
 
 		 1609 aa  50.1  0.0003  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_0653  YhgE/Pip N-terminal domain protein  38.67 
 
 		 797 aa  46.6  0.003  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000732474  n/a   
 
 
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