18 homologs were found in PanDaTox collection
for query gene Sbal_3592 on replicon NC_009052
Organism: Shewanella baltica OS155



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007954  Sden_3243  Phage tail tape measure protein TP901, core region  66.27 
 
 
1419 aa  1752    Shewanella denitrificans OS217  Bacteria  normal  0.948991  n/a   
 
 
-
 
NC_009052  Sbal_3592  TP901 family phage tail tape measure protein  100 
 
 
1426 aa  2807    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0797  TP901 family phage tail tape measure protein  98.95 
 
 
1426 aa  2778    Shewanella baltica OS195  Bacteria  normal  normal  0.274443 
 
 
-
 
NC_009665  Shew185_0765  phage tail tape measure protein, TP901 family  48.32 
 
 
1306 aa  434  1e-120  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0789  phage tape measure protein  66.88 
 
 
1306 aa  365  3e-99  Shewanella baltica OS223  Bacteria  normal  normal  0.204936 
 
 
-
 
NC_008345  Sfri_1684  phage tape measure protein  52.92 
 
 
1292 aa  276  2.0000000000000002e-72  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1466  phage tail tape measure protein, TP901 family  26.87 
 
 
1092 aa  120  3e-25  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0522  phage tail tape measure protein, TP901 family  29.51 
 
 
1628 aa  102  7e-20  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.389644  n/a   
 
 
-
 
NC_013174  Jden_2178  phage tail tape measure protein, TP901 family  28.93 
 
 
1342 aa  97.1  2e-18  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_02660  phage tail tape measure protein, TP901 family  22.01 
 
 
1095 aa  75.9  0.000000000005  Cryptobacterium curtum DSM 15641  Bacteria  normal  hitchhiker  0.00000000274947 
 
 
-
 
NC_009997  Sbal195_2149  phage tape measure protein  25.07 
 
 
1308 aa  73.9  0.00000000002  Shewanella baltica OS195  Bacteria  normal  0.843593  normal 
 
 
-
 
NC_004347  SO_0680  hypothetical protein  23.69 
 
 
1308 aa  69.7  0.0000000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_002978  WD0570  prophage P2W3, tail tape measure protein  24.32 
 
 
680 aa  58.2  0.000001  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1133  hypothetical protein  23.49 
 
 
739 aa  49.3  0.0005  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0394  hypothetical protein  23.49 
 
 
739 aa  49.3  0.0005  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE0222  TP901 family tail tape measure protein  24.76 
 
 
738 aa  48.5  0.0009  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1155  TP901 family phage tail tape measure protein  22.77 
 
 
739 aa  47.8  0.002  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_1592  chromosome segregation protein, Smc family protein  28.57 
 
 
1178 aa  47  0.003  Cytophaga hutchinsonii ATCC 33406  Bacteria  decreased coverage  0.00176998  normal  0.493606 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>