15 homologs were found in PanDaTox collection
for query gene Strop_1987 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009380  Strop_1987  helix-turn-helix domain-containing protein  100 
 
 		 415 aa  820    Salinispora tropica CNB-440  Bacteria  hitchhiker  0.00401079  normal  0.325189 
 
 
-
 
NC_013093  Amir_1281  transcriptional regulator, XRE family  48.07 
 
 		 419 aa  324  2e-87  Actinosynnema mirum DSM 43827  Bacteria  normal  0.525264  n/a   
 
 
-
 
NC_009921  Franean1_5660  XRE family transcriptional regulator  40.24 
 
 		 490 aa  63.5  0.000000006  Frankia sp. EAN1pec  Bacteria  normal  0.176576  normal  0.652733 
 
 
-
 
NC_007777  Francci3_0858  XRE family transcriptional regulator  37.08 
 
 		 497 aa  62.8  0.00000001  Frankia sp. CcI3  Bacteria  normal  0.359757  normal  1 
 
 
-
 
NC_007777  Francci3_1136  XRE family transcriptional regulator  37.97 
 
 		 282 aa  56.2  0.0000009  Frankia sp. CcI3  Bacteria  normal  0.113401  normal  1 
 
 
-
 
NC_009921  Franean1_5332  XRE family transcriptional regulator  37.97 
 
 		 392 aa  56.2  0.000001  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.0406632 
 
 
-
 
NC_013131  Caci_4024  transcriptional regulator, XRE family  35.23 
 
 		 483 aa  54.7  0.000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0917395  hitchhiker  0.00196902 
 
 
-
 
NC_007333  Tfu_1813  helix-hairpin-helix DNA-binding motif-containing protein  39.19 
 
 		 444 aa  52  0.00002  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_1022  XRE family transcriptional regulator  34.52 
 
 		 441 aa  51.2  0.00003  Frankia sp. CcI3  Bacteria  normal  0.842716  normal  0.936661 
 
 
-
 
NC_013510  Tcur_4907  transcriptional regulator, XRE family  33.7 
 
 		 433 aa  49.7  0.0001  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_6314  helix-turn-helix domain-containing protein  35.06 
 
 		 443 aa  48.9  0.0002  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_5545  XRE family transcriptional regulator  35.06 
 
 		 443 aa  47.8  0.0003  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011365  Gdia_0985  transcriptional regulator, XRE family  43.86 
 
 		 83 aa  44.3  0.004  Gluconacetobacter diazotrophicus PAl 5  Bacteria  hitchhiker  0.00196627  normal  1 
 
 
-
 
NC_013595  Sros_0702  hypothetical protein  28.57 
 
 		 405 aa  44.3  0.004  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.554394 
 
 
-
 
NC_010320  Teth514_0096  Sua5/YciO/YrdC/YwlC family protein  24.79 
 
 		 354 aa  43.5  0.008  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
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