| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1987 |
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| Symbol | |
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| ID | 5058450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2253683 |
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| End bp | 2254930 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640474253 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001158819 |
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| Protein GI | 145594522 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00401079 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.325189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTGCC GGGCCTGCGC CACCTCCGTC GACGAACCTG ATGGCGTGCC GCTGTGCCCG
GCCTGCGCCG CGGTCACCGG CAGCCCGCGC GAGCCTGCCC GTTCTGCCTC GACGTCCGCG
CTGTGGCTGT GGACGAGCCC GCAGGCAGCG GCAGCGCTCG CCACCGGCGA CCTGGGCGTA
ATGATCCGCA CCTGGCGGCA GGCCACCGGG ACGAGCCAGC TCGCCCTGGC CGAAAAGCTC
GGCTACGACC CCTCCTACAT CTCCATGATC GAAACTCGGC GGCGGGACGT CGTCGACATC
GTCAACCGGA GGCGCATCGC CCAGCACCTC GGTATCCCAC TGCACCGGGT CGGCGTCACC
GACACCGAGG CCGTCGACCA CGTCACCATG CTGCAGTTTG GATACTCGAC CCTGCGCCTT
GCCACGATCG CCCGCCACGC CGGCCACGGC GCCGCCGCCG TCAACGAGCT GTGGCCGCTG
GTCGCCCGCC TCGAAGCCCG CGCCGCCGAC GGCATCATCG ACAAGGACAT GCTGCTCCTG
CTCGCCCGCG CACGCGCCGA ACTCGGTGTC TCCCTCGGTT ACGTGCTGCC AGAGGAACGG
CTGGCGTTCG CCATACGGTG GACCGGCAGG GCACTGCGCG TCGCCGAACA CCTCGACGAC
ACCGACTTGC ACGCCTACAC CCTGCGCGTA CACGGCAACG AACTCCGCAA GGCAGGCAGG
GTCAACGCAG CCCTGGTCCG ACTCGCCCAC GCCATCGCCA TCGTCAGTGC CGACCAACGG
CCACCGGCGC TCGTCCAACT CGCACGCGCC GCCCAGGACC CCGCGACGTT CGACGCCACG
CTCACCGAAC TGCACCGCAG CCAGGACCGC CCAGCCTCCG ACGATCCGCT CGTCAGCGCC
ACAGCCGTCC GAGAAGTCCA CCTCCGCGGG CTCATCACCA CCGGCCGCGC CCCGCAAGCG
ATCGCTCTGC TCAGTGCCTC CCCGGCTCCC ACCCTGCCGA CATCGCCGCA ATGGCGCATC
ATCGAGCAGA TCACCATCGC CGAGGTGCTG CTCGCCGCCG GAGACGTCAC CACAGGCGAG
TCCACGCTGC ACGACGCCAT CGGCGGCGGC GAACGGCACC GGCTGCCCCA CCAGCTCCAG
CGAGCCGCCC GGGTCGCCCA AGGGCACTGT CCCACCGTGG TCGAAGCCGC GTCGGCCGCG
CTGAGCCGGT CAACGACCCC TGCCGCTGGC TACCCGACGC AGGGTTGA
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| Protein sequence | MRCRACATSV DEPDGVPLCP ACAAVTGSPR EPARSASTSA LWLWTSPQAA AALATGDLGV
MIRTWRQATG TSQLALAEKL GYDPSYISMI ETRRRDVVDI VNRRRIAQHL GIPLHRVGVT
DTEAVDHVTM LQFGYSTLRL ATIARHAGHG AAAVNELWPL VARLEARAAD GIIDKDMLLL
LARARAELGV SLGYVLPEER LAFAIRWTGR ALRVAEHLDD TDLHAYTLRV HGNELRKAGR
VNAALVRLAH AIAIVSADQR PPALVQLARA AQDPATFDAT LTELHRSQDR PASDDPLVSA
TAVREVHLRG LITTGRAPQA IALLSASPAP TLPTSPQWRI IEQITIAEVL LAAGDVTTGE
STLHDAIGGG ERHRLPHQLQ RAARVAQGHC PTVVEAASAA LSRSTTPAAG YPTQG
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