22 homologs were found in PanDaTox collection
for query gene Ssed_3273 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009831  Ssed_3273  cyclic nucleotide binding protein, putative  100 
 
 		 238 aa  496  1e-140  Shewanella sediminis HAW-EB3  Bacteria  normal  0.715975  normal  0.0894571 
 
 
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NC_010506  Swoo_3424  cyclic nucleotide-binding protein  82.14 
 
 		 226 aa  398  9.999999999999999e-111  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
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NC_009901  Spea_3786  cyclic nucleotide-binding protein  76.68 
 
 		 223 aa  375  1e-103  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
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NC_004347  SO_2717  cyclic nucleotide binding protein, putative  66.37 
 
 		 226 aa  318  6e-86  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
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NC_009438  Sputcn32_1659  cyclic nucleotide-binding protein  65.92 
 
 		 226 aa  315  4e-85  Shewanella putrefaciens CN-32  Bacteria  normal  0.0131527  n/a   
 
 
-
 
NC_009997  Sbal195_1840  cyclic nucleotide-binding protein  65.92 
 
 		 226 aa  315  4e-85  Shewanella baltica OS195  Bacteria  hitchhiker  0.00716362  normal  1 
 
 
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NC_008577  Shewana3_2501  cyclic nucleotide-binding protein  65.47 
 
 		 226 aa  314  6e-85  Shewanella sp. ANA-3  Bacteria  normal  0.0611932  hitchhiker  0.00056277 
 
 
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NC_009456  VC0395_0003  putative cyclic nucleotide binding protein  45.95 
 
 		 226 aa  207  1e-52  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000897853  n/a   
 
 
-
 
NC_013457  VEA_000333  predicted N-ribosylNicotinamide CRP-like regulator  44.39 
 
 		 226 aa  200  1.9999999999999998e-50  Vibrio sp. Ex25  Bacteria  hitchhiker  0.000000153311  n/a   
 
 
-
 
NC_009784  VIBHAR_06137  hypothetical protein  41.7 
 
 		 226 aa  193  2e-48  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_4298  cyclic nucleotide binding protein, putative  42.79 
 
 		 224 aa  192  5e-48  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_3489  cyclic nucleotide-binding protein  41.89 
 
 		 224 aa  187  1e-46  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_0546  cyclic nucleotide-binding protein  42.15 
 
 		 230 aa  187  1e-46  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_3793  cyclic nucleotide-binding protein  41.7 
 
 		 230 aa  186  3e-46  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_0551  cyclic nucleotide-binding protein  41.7 
 
 		 230 aa  186  3e-46  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_3683  cyclic nucleotide binding protein, putative  35.16 
 
 		 220 aa  136  3.0000000000000003e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_1924  cyclic nucleotide binding protein, putative  31.41 
 
 		 222 aa  124  2e-27  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_1798  transcriptional regulator, Crp/Fnr family  23.76 
 
 		 224 aa  50.1  0.00003  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.112724  normal  0.701218 
 
 
-
 
NC_011138  MADE_00758  putative transcriptional regulator (Crp family) protein  22.64 
 
 		 223 aa  48.1  0.0001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  24.18 
 
 		 247 aa  42.7  0.005  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
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NC_011884  Cyan7425_1753  cyclic nucleotide-binding protein  23.97 
 
 		 357 aa  42.7  0.005  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  23.4 
 
 		 226 aa  42  0.009  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.974187 
 
 
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