| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3683 |
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| Symbol | |
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| ID | 5613966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4487017 |
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| End bp | 4487679 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640934636 |
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| Product | cyclic nucleotide binding protein, putative |
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| Protein accession | YP_001475415 |
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| Protein GI | 157376815 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGATATT TAGACAGAAT GATTCAGCAA GGTTTCGAAA TATTTAGTCA GAATGTTGAA
CGACCAGAAT TGAAAGTAAA ACAGATGAAG CCTCAAGATT TTATTCTGAG ACAAGGGCAA
GAAATTTCTG AACTCTACTG GCTAAAATCG GGCGCCTGCA CCATAGCCTA TAACGCAGAA
AATGGACGTC GATTTAATCT GGGGAGATTA AGAGCAAGAT CTCGATTATT TGGTGAGATT
GAATGGCTAA ACAATAGTCC CTGTCAGTTT GAGGTTTGTG CCGATGAGCC TATAGAGCTT
ATCGTTTTAC CACTTAATTT TGTCACCGAG TTGATAGAGT CGCACGCGAG TATCGGCCTC
TGGTTGAGTC ATTGCTTGTC CACCAAGTAC CATGACGGCA TTGAGTTTAC CTTAGCTCAG
ATCCTGTACC CTCTTAGTTA TAACATTGCG CTTGACCTAA AGCACAGACA GCAAGGAAGC
CGTCCGGAGA TCAGTTTTCG TCAACTCTAT CGAGAAGCTG AGCGCTTTGG ATGTTCCGAA
AGAGTATTTC GCAAAGTCGT CGCTCAGTTG CAAACTTTAG GCTTAGTAGA AAAAGTAGAA
CATCAATTAA AAATTCTGGA TATGGAAAAG CTCGAGGCTT TTATCGAGAG TATGGAAAAA
TAG
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| Protein sequence | MRYLDRMIQQ GFEIFSQNVE RPELKVKQMK PQDFILRQGQ EISELYWLKS GACTIAYNAE
NGRRFNLGRL RARSRLFGEI EWLNNSPCQF EVCADEPIEL IVLPLNFVTE LIESHASIGL
WLSHCLSTKY HDGIEFTLAQ ILYPLSYNIA LDLKHRQQGS RPEISFRQLY REAERFGCSE
RVFRKVVAQL QTLGLVEKVE HQLKILDMEK LEAFIESMEK
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