| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3424 |
|---|
| Symbol | |
|---|
| ID | 6117756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4188422 |
|---|
| End bp | 4189102 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641634979 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_001761787 |
|---|
| Protein GI | 170727761 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTAA AACCTCTCTC TAAAGGGCGA TTTCATTCGC TCTGGCAGCA GGAACATCAT
GATATCGAAG AGATCATGGC AGACTGTGTC AGTGATACTC GTCTAATGCC CGCTCATCAT
AAATTGATGG AGCAGGGGCA AAAAGTGAGT ACGCTTATTC TTGTTAAGCG AGGGCGGATC
TCCATGGGAT ATACCGCGAG AAATGCGCGT AGCTTTCAGT TAGGTACTAT GGAGTGCGAT
TCCCAGATTT TTGGTGAGAT GGAGTTTTTT AGCGATTATC TGTGTCAGCT TGATATCATC
GCCGAAGAGG AGTTGGAGGT TCAGATTATT TGTGGCGATA AGCTACAAAG AGCACTCACT
CAAAAGCCGA TGTTCGCCCT TTTTTTTGCC AGTGCAATAG CGATTGATTA TCAAGATACG
GTGGATATTT TGACCCGTCG TATGCTCTAC CCTATTGCCT ATAACATCGC TTATGATCTC
TATCACCAAT ACCTTAATGA TCAACCTGTA GATGGTTTTA CTAAGTGCTA TCTGGAGGCG
GAACGTTTTG CCACCACTGA TAGAGTCTAT CGTCGTGCAG TGAAGAGGTT AGAGGAGCTG
GGGCTGATCT TAAGGGATAA GGAGGAGGGG ATAGTGATTA ACGATCTCGA TGGTTTGATC
GCTTATATCG AGGAGAGATA A
|
|---|
| Protein sequence | MQLKPLSKGR FHSLWQQEHH DIEEIMADCV SDTRLMPAHH KLMEQGQKVS TLILVKRGRI
SMGYTARNAR SFQLGTMECD SQIFGEMEFF SDYLCQLDII AEEELEVQII CGDKLQRALT
QKPMFALFFA SAIAIDYQDT VDILTRRMLY PIAYNIAYDL YHQYLNDQPV DGFTKCYLEA
ERFATTDRVY RRAVKRLEEL GLILRDKEEG IVINDLDGLI AYIEER
|
|---|
| |