21 homologs were found in PanDaTox collection
for query gene Snas_1629 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_1629  TipAS antibiotic-recognition domain-containing protein  100 
 
 
148 aa  305  1.0000000000000001e-82  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.651813  normal  0.0608845 
 
 
-
 
NC_009953  Sare_0969  MerR family transcriptional regulator  38.85 
 
 
252 aa  105  3e-22  Salinispora arenicola CNS-205  Bacteria  decreased coverage  0.00256708  hitchhiker  0.0060004 
 
 
-
 
NC_013441  Gbro_0409  TipAS antibiotic-recognition domain protein  37.68 
 
 
259 aa  97.1  7e-20  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1079  TipAS antibiotic-recognition domain-containing protein  35 
 
 
252 aa  96.7  1e-19  Salinispora tropica CNB-440  Bacteria  normal  normal  0.23199 
 
 
-
 
NC_013235  Namu_4698  transcriptional regulator, MerR family  36.11 
 
 
253 aa  90.1  9e-18  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2151  transcriptional regulator, MerR family  33.33 
 
 
253 aa  89.4  1e-17  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.447172 
 
 
-
 
NC_008726  Mvan_1919  MerR family transcriptional regulator  38.81 
 
 
268 aa  89  2e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0931546  normal 
 
 
-
 
NC_013757  Gobs_0255  transcriptional regulator, MerR family  36.17 
 
 
251 aa  87.8  4e-17  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_24960  predicted transcriptional regulator  32.39 
 
 
270 aa  84  7e-16  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4442  putative transcriptional regulator, MerR family  31.72 
 
 
253 aa  82  0.000000000000003  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.00264375  hitchhiker  0.000476994 
 
 
-
 
NC_014158  Tpau_3393  transcriptional regulator, MerR family  34.31 
 
 
254 aa  81.6  0.000000000000004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.988274  n/a   
 
 
-
 
NC_009338  Mflv_0148  MerR family transcriptional regulator  35.82 
 
 
257 aa  80.5  0.000000000000008  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.290112  normal 
 
 
-
 
NC_013521  Sked_34160  predicted transcriptional regulator  37.86 
 
 
278 aa  80.1  0.00000000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.153651 
 
 
-
 
NC_013739  Cwoe_0384  transcriptional regulator, MerR family  31.25 
 
 
258 aa  77.8  0.00000000000005  Conexibacter woesei DSM 14684  Bacteria  normal  0.0450143  decreased coverage  0.00634425 
 
 
-
 
NC_013947  Snas_2603  transcriptional regulator, MerR family  31.11 
 
 
274 aa  72  0.000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.241665  normal  0.676341 
 
 
-
 
NC_013172  Bfae_23430  predicted transcriptional regulator  31.11 
 
 
271 aa  69.3  0.00000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0376314  n/a   
 
 
-
 
NC_013510  Tcur_1222  transcriptional regulator, MerR family  32.17 
 
 
254 aa  68.6  0.00000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  0.867665  n/a   
 
 
-
 
NC_009077  Mjls_5434  MerR family transcriptional regulator  30.43 
 
 
251 aa  59.7  0.00000002  Mycobacterium sp. JLS  Bacteria  normal  0.736735  normal 
 
 
-
 
NC_008705  Mkms_5143  MerR family transcriptional regulator  30.43 
 
 
251 aa  58.9  0.00000003  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5055  MerR family transcriptional regulator  30.43 
 
 
251 aa  58.9  0.00000003  Mycobacterium sp. MCS  Bacteria  normal  0.561645  n/a   
 
 
-
 
NC_014210  Ndas_3285  transcriptional regulator, MerR family  24.81 
 
 
272 aa  47.4  0.00007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.235229  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>