Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0969 |
Symbol | |
ID | 5703638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1092730 |
End bp | 1093488 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641270485 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001535872 |
Protein GI | 159036619 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00256708 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0060004 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGCTACT CGGTGGGGCA GGTGGCGAAG GCGGCCGGCG TGACAGTGCG GACGCTGCAC CACTATGACG AGATCGGCCT GCTGTCGCCA CACGGTCGCA GTAGTGCGGG CTACCGCCGC TACCACGACC TGGACCTGGA GCGGCTGCAG TTGATCCGCT ACTACCGGGA GCTGGGGTTC CCGTTGGACG AGATCGCCAC GATTCTGGAT GACCCGGCGA GCGACCCGGC GGAGCACCTG CGTCGGCAGC ACGAGCTGCT GACCGGGCGG ATCGGGAAGC TCCAGGACAT GGTCGCGGCG ATCGAACTCG CGATGGAGGC ACGGAAGATG AACATCTCGT TGACGCCGGA GGAGCGGTTC GAGGTCTTCG GCGATGCCGA TCCGGACGCG TACGCCGAGG AGGCGGAGCG GCGGTGGGGC GGCACTGGGG CGTACCAGGC GTCTGCCCGG CGCGCCGCCA GCTACTCGAA GGACGACTGG CTGCGTCACA AGGCCGCGAA CGAGGACTGG GGCCGCCGTT TCACCGAGGT GATGACGTCC GGGGTGGCGC CGGACAGCCC GGCGGCCATG GATCTGGCCG AGGAACACCG GCAACTGATC AGCCAGTGGT TCTACGACTG CTCGTATGAG GTCCACACCG GCCTGGCTGA CATGTACCTC GCGGACCCAC GGTTCACCGA GTACTACGAG CGGATCCGGC CAGGGATGGC CACCTACCTC AGCGCGGCCA TCCACGCCAA TGCGGTCAGC CGGGCTTGA
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Protein sequence | MGYSVGQVAK AAGVTVRTLH HYDEIGLLSP HGRSSAGYRR YHDLDLERLQ LIRYYRELGF PLDEIATILD DPASDPAEHL RRQHELLTGR IGKLQDMVAA IELAMEARKM NISLTPEERF EVFGDADPDA YAEEAERRWG GTGAYQASAR RAASYSKDDW LRHKAANEDW GRRFTEVMTS GVAPDSPAAM DLAEEHRQLI SQWFYDCSYE VHTGLADMYL ADPRFTEYYE RIRPGMATYL SAAIHANAVS RA
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