Gene Sare_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0969 
Symbol 
ID5703638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1092730 
End bp1093488 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content68% 
IMG OID641270485 
ProductMerR family transcriptional regulator 
Protein accessionYP_001535872 
Protein GI159036619 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00256708 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0060004 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCTACT CGGTGGGGCA GGTGGCGAAG GCGGCCGGCG TGACAGTGCG GACGCTGCAC 
CACTATGACG AGATCGGCCT GCTGTCGCCA CACGGTCGCA GTAGTGCGGG CTACCGCCGC
TACCACGACC TGGACCTGGA GCGGCTGCAG TTGATCCGCT ACTACCGGGA GCTGGGGTTC
CCGTTGGACG AGATCGCCAC GATTCTGGAT GACCCGGCGA GCGACCCGGC GGAGCACCTG
CGTCGGCAGC ACGAGCTGCT GACCGGGCGG ATCGGGAAGC TCCAGGACAT GGTCGCGGCG
ATCGAACTCG CGATGGAGGC ACGGAAGATG AACATCTCGT TGACGCCGGA GGAGCGGTTC
GAGGTCTTCG GCGATGCCGA TCCGGACGCG TACGCCGAGG AGGCGGAGCG GCGGTGGGGC
GGCACTGGGG CGTACCAGGC GTCTGCCCGG CGCGCCGCCA GCTACTCGAA GGACGACTGG
CTGCGTCACA AGGCCGCGAA CGAGGACTGG GGCCGCCGTT TCACCGAGGT GATGACGTCC
GGGGTGGCGC CGGACAGCCC GGCGGCCATG GATCTGGCCG AGGAACACCG GCAACTGATC
AGCCAGTGGT TCTACGACTG CTCGTATGAG GTCCACACCG GCCTGGCTGA CATGTACCTC
GCGGACCCAC GGTTCACCGA GTACTACGAG CGGATCCGGC CAGGGATGGC CACCTACCTC
AGCGCGGCCA TCCACGCCAA TGCGGTCAGC CGGGCTTGA
 
Protein sequence
MGYSVGQVAK AAGVTVRTLH HYDEIGLLSP HGRSSAGYRR YHDLDLERLQ LIRYYRELGF 
PLDEIATILD DPASDPAEHL RRQHELLTGR IGKLQDMVAA IELAMEARKM NISLTPEERF
EVFGDADPDA YAEEAERRWG GTGAYQASAR RAASYSKDDW LRHKAANEDW GRRFTEVMTS
GVAPDSPAAM DLAEEHRQLI SQWFYDCSYE VHTGLADMYL ADPRFTEYYE RIRPGMATYL
SAAIHANAVS RA