| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_34160 |
|---|
| Symbol | |
|---|
| ID | 8635049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 3817039 |
|---|
| End bp | 3817875 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | predicted transcriptional regulator |
|---|
| Protein accession | YP_003316141 |
|---|
| Protein GI | 269796686 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.153651 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC ACCCTGGCAC CCGCCCGTCA GCCGGCAGCG CGACCGACCA CGTCACCGAC
CGCACCGTCG GTGACGTGGC GCGCCTCGCC GGGGTCACCG TCCGGACGCT CCACCACTGG
GACACGATCG GGCTCGTCGC ACCGTCCGGC CGGTCCTCGG GCGGGTACCG GCTCTACCGG
GCGGCAGACG TCGCCCGCGT CCACCGGGTG CTCCTCTACC GCGAGCTCGG GCTCCCGCTC
GAGCGCATCA GCGAGCTGCT CGACGCTCCC GGCGCCACCT CGGCGGCGAC GCTGCGTGAG
CAGCGGGCCG AGCTTGCCGC GCACATCTCC CGGCTGCAGT CGATGGTCGT CGCGGTCGAC
CGCCTCGTCG AGGCCGCCGA CCGCGGGATA CTGCTGTCCG ACGAGGAGCA GGTCGCGATC
TTCGGCGACG GGTGGCAGCC GTCGTGGGTG GCCGAGGCGC ACGACCGCTG GGGCGACTCG
ACGCAGTGGG CCGAGTACGC CGAGCGCTCC GCGAGCATGG ACGCCGACGA CTGGCAACAG
GTGGCCGACC GCGCGGCCGC ACTGTCGCAG CGGCTCGTCG ACGCGATGGC AGCCGGGGTG
CAGCCCGGCT CCCCGGAGGC CGACGCCGTC GCGGAGCTGC ACCGCGCGTC GATCGACGAG
CACTTCACGT GCTCGCGGTC CATGCAGGTG TGCCTGGCCC GGACCTACAC CGACGACCCG
CGCTTCCGCG CGCACTACGA GGGCCTGTCC CCCGGGCTGG CAGCCTGGCT GCGCGCCGTC
ATCGAGGAGT CGGCGAGAGC CCACGACGTC GACCCGGAGA CGGCAACCTG GGAGTGA
|
|---|
| Protein sequence | MTEHPGTRPS AGSATDHVTD RTVGDVARLA GVTVRTLHHW DTIGLVAPSG RSSGGYRLYR
AADVARVHRV LLYRELGLPL ERISELLDAP GATSAATLRE QRAELAAHIS RLQSMVVAVD
RLVEAADRGI LLSDEEQVAI FGDGWQPSWV AEAHDRWGDS TQWAEYAERS ASMDADDWQQ
VADRAAALSQ RLVDAMAAGV QPGSPEADAV AELHRASIDE HFTCSRSMQV CLARTYTDDP
RFRAHYEGLS PGLAAWLRAV IEESARAHDV DPETATWE
|
|---|
| |