Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1079 |
Symbol | |
ID | 5057526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1225694 |
End bp | 1226452 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640473346 |
Product | TipAS antibiotic-recognition domain-containing protein |
Protein accession | YP_001157928 |
Protein GI | 145593631 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.23199 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTACT CGGTGGGGCA GGTGGCGAAG GCGGCCGGCG TAACGGTTCG GACGCTGCAC CACTACGACG AGATCGGGCT GCTGTCGCCA CACGGTCGCA GTAGTGCGGG CTACCGCCGC TACAACGACA TGGATCTTGA GCGGTTGCAG CTGATCCGCT ACTACCGGGA GCTGGGGTTC CCGTTGGACG AGATCGCCAC GATTCTGGAC GATCCGGCGA GCGACCCGGC GGAGCACCTG CGTCAGCAGC ACGAGCTGCT GACCGGGCGG ATCGGGAAGC TCCAGGAGAT GGTCGCGGCG ATCGAACTCG CGATGGAGGC ACGGAAGATG AACATCCAGT TGACGCCGGA GGAGCGGTTC GAGGTCTTCG GCGACGCCGA TCCGGAGTTG TACGCCGAGG AGGCGAAGCA GCGGTGGAGC GGCACCGAGG CGTACCAGGA GTCGTCCCGG CGCACCTCCG GCTACTCGAA GGACGACTGG CTGCGCCACA AGGCCGAGAA CGAGGACTGG GGCCGCCGGT TGACCGAGGT GATGGCGTCT GGGGCGGCGA CGGACAGCCC GGCGGCGATG GAGCTGGCCG AGGAGCACCG GCAGCTGATC AGTCGGTGGT TCTACGACTG CCCCTATGAG GCGCACACCG GCCTGGCCGA CATGTACCTC GCGGACCCAC GGTTCACCGA ATACTTCGAG CGGATCCAGC CAGGAATGGC CGCCTACCTC AGCGAGGCCA TCCACGCCAA CGCGGTCAGC CGGGCTTGA
|
Protein sequence | MAYSVGQVAK AAGVTVRTLH HYDEIGLLSP HGRSSAGYRR YNDMDLERLQ LIRYYRELGF PLDEIATILD DPASDPAEHL RQQHELLTGR IGKLQEMVAA IELAMEARKM NIQLTPEERF EVFGDADPEL YAEEAKQRWS GTEAYQESSR RTSGYSKDDW LRHKAENEDW GRRLTEVMAS GAATDSPAAM ELAEEHRQLI SRWFYDCPYE AHTGLADMYL ADPRFTEYFE RIQPGMAAYL SEAIHANAVS RA
|
| |