16 homologs were found in PanDaTox collection
for query gene Shel_11380 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013165  Shel_11380  transcriptional regulator, AbrB family  100 
 
 		 69 aa  137  3.9999999999999997e-32  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
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NC_011830  Dhaf_1655  transcriptional regulator, AbrB family  61.76 
 
 		 79 aa  88.6  3e-17  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.336851  n/a   
 
 
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NC_002967  TDE0703  AbrB family transcriptional regulator  61.19 
 
 		 74 aa  87.4  5e-17  Treponema denticola ATCC 35405  Bacteria  normal  0.751889  n/a   
 
 
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NC_013517  Sterm_1868  transcriptional regulator, AbrB family  58.46 
 
 		 75 aa  82  0.000000000000002  Sebaldella termitidis ATCC 33386  Bacteria  unclonable  0.0000000000975401  n/a   
 
 
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NC_009712  Mboo_2181  AbrB family transcriptional regulator  49.09 
 
 		 92 aa  63.2  0.000000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.0824965  normal  1 
 
 
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NC_002967  TDE0344  AbrB family transcriptional regulator  71.43 
 
 		 73 aa  62  0.000000002  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
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NC_013165  Shel_25910  looped-hinge helix DNA binding domain, AbrB family  46.27 
 
 		 144 aa  62.4  0.000000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
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NC_009051  Memar_0329  AbrB family transcriptional regulator  63.04 
 
 		 86 aa  61.2  0.000000004  Methanoculleus marisnigri JR1  Archaea  normal  0.485621  n/a   
 
 
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NC_013203  Apar_0844  transcriptional regulator, XRE family  54.17 
 
 		 142 aa  53.9  0.0000007  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  0.0958964 
 
 
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NC_013517  Sterm_0118  transcriptional regulator, AbrB family  41.07 
 
 		 70 aa  48.9  0.00003  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
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NC_014210  Ndas_0985  transcriptional regulator, AbrB family  50 
 
 		 95 aa  47.8  0.00004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  decreased coverage  0.00370764  normal  1 
 
 
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NC_009483  Gura_3494  AbrB family transcriptional regulator  39.66 
 
 		 81 aa  43.9  0.0007  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
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NC_002936  DET1616  AbrB family transcriptional regulator  46.81 
 
 		 90 aa  43.1  0.001  Dehalococcoides ethenogenes 195  Bacteria  normal  0.345256  n/a   
 
 
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NC_009455  DehaBAV1_1362  hypothetical protein  46.81 
 
 		 90 aa  43.1  0.001  Dehalococcoides sp. BAV1  Bacteria  normal  0.787025  n/a   
 
 
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NC_013552  DhcVS_1498  transcriptional regulator, AbrB family  46.81 
 
 		 90 aa  42.7  0.002  Dehalococcoides sp. VS  Bacteria  normal  0.794693  n/a   
 
 
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NC_011661  Dtur_0060  transcriptional regulator, AbrB family  56.67 
 
 		 81 aa  41.2  0.004  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.0000160272  n/a   
 
 
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