15 homologs were found in PanDaTox collection
for query gene Ndas_0985 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014210  Ndas_0985  transcriptional regulator, AbrB family  100 
 
 		 95 aa  187  2.9999999999999997e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  decreased coverage  0.00370764  normal  1 
 
 
-
 
NC_013203  Apar_0844  transcriptional regulator, XRE family  45.9 
 
 		 142 aa  62  0.000000002  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  0.0958964 
 
 
-
 
NC_013165  Shel_25910  looped-hinge helix DNA binding domain, AbrB family  50.85 
 
 		 144 aa  61.2  0.000000004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009712  Mboo_2181  AbrB family transcriptional regulator  54.72 
 
 		 92 aa  60.5  0.000000008  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.0824965  normal  1 
 
 
-
 
NC_011661  Dtur_0060  transcriptional regulator, AbrB family  49.09 
 
 		 81 aa  57.8  0.00000006  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.0000160272  n/a   
 
 
-
 
NC_009051  Memar_0329  AbrB family transcriptional regulator  47.17 
 
 		 86 aa  53.5  0.000001  Methanoculleus marisnigri JR1  Archaea  normal  0.485621  n/a   
 
 
-
 
NC_002936  DET1616  AbrB family transcriptional regulator  46 
 
 		 90 aa  51.6  0.000003  Dehalococcoides ethenogenes 195  Bacteria  normal  0.345256  n/a   
 
 
-
 
NC_009455  DehaBAV1_1362  hypothetical protein  46 
 
 		 90 aa  51.6  0.000003  Dehalococcoides sp. BAV1  Bacteria  normal  0.787025  n/a   
 
 
-
 
NC_013552  DhcVS_1498  transcriptional regulator, AbrB family  46 
 
 		 90 aa  52  0.000003  Dehalococcoides sp. VS  Bacteria  normal  0.794693  n/a   
 
 
-
 
NC_013517  Sterm_1868  transcriptional regulator, AbrB family  45.45 
 
 		 75 aa  50.1  0.00001  Sebaldella termitidis ATCC 33386  Bacteria  unclonable  0.0000000000975401  n/a   
 
 
-
 
NC_002967  TDE0703  AbrB family transcriptional regulator  40.91 
 
 		 74 aa  48.5  0.00003  Treponema denticola ATCC 35405  Bacteria  normal  0.751889  n/a   
 
 
-
 
NC_013165  Shel_11380  transcriptional regulator, AbrB family  50 
 
 		 69 aa  47.8  0.00005  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1655  transcriptional regulator, AbrB family  45.28 
 
 		 79 aa  47.4  0.00006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.336851  n/a   
 
 
-
 
NC_002967  TDE0344  AbrB family transcriptional regulator  32.47 
 
 		 73 aa  45.8  0.0002  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013517  Sterm_0118  transcriptional regulator, AbrB family  44.19 
 
 		 70 aa  45.1  0.0003  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>