Gene Shel_25910 details

Gene Information

• Locus tag: Shel_25910
• ID: 8396479
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Slackia heliotrinireducens DSM 20476
• Kingdom: Bacteria
• Replicon accession: NC_013165
• Strand: +
• Start bp: 2862829
• End bp: 2863263
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644987334
• Product: looped-hinge helix DNA binding domain, AbrB family
• Protein accession: YP_003144945
• Protein GI: 257065273
• COG category: [K] Transcription
• COG ID: [COG1476] Predicted transcriptional regulators
• TIGRFAM ID: [TIGR01439] looped-hinge helix DNA binding domain, AbrB family

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGCATCG CGCAGAACAT ACTGGCAGCG CGCCAGAGGT CGGGGCTTAC GCAGGAGCAG 
CTGGCGGCGT CGGTCGGCGT GTCGCGGCAG ACGGTGGCCA AGTGGGAGTC CGGGGAAACC 
TCGCCCGACC TCGAGCACGC GGCGGCGTTG GCTGCTACCT TGGACACGAC GGTGGACGGG 
CTGGTGTCAT TCGACGACGC CGGCTTGGGA ATTGCGCCTC CGCCCCGAGG AAAGCACCTG 
TTCGGAAGCG TGAAAGTGGG AGAGCGCGGG CAGATCGTCA TCCCCAAGGA GGCGCGCGAG 
GTGTTCGGCA TCCGTCCCGG CGACAAGCTG GTGGTGCTGG GCGAGGACGG CCAGGGCATC 
GCGCTGTGCA AGGAGTCGGA GTTCATGGCG GGCGTCGAGG CCGTCATGGC GGCCGTGCGC 
AGGTCGGCGC TATGA 

 

Protein sequence

MGIAQNILAA RQRSGLTQEQ LAASVGVSRQ TVAKWESGET SPDLEHAAAL AATLDTTVDG 
LVSFDDAGLG IAPPPRGKHL FGSVKVGERG QIVIPKEARE VFGIRPGDKL VVLGEDGQGI 
ALCKESEFMA GVEAVMAAVR RSAL