| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0844 |
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| Symbol | |
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| ID | 8413710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 938199 |
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| End bp | 938627 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022427 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_003179864 |
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| Protein GI | 257784647 |
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| COG category | [K] Transcription |
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| COG ID | [COG1476] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0958964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTTTG CCGAGAATTT AGTAGAACTT AGAAAATACC ATGATTTTTC CCAGGAAGAA
CTGGCGGACA TGATCGGTGT TTCCCGCCAG ACCCTCTCAA AATATGAGAC AGGAGAGTCT
CTTCCGGATA TCGAAAAATG CAAACGCTTT GCGAATGTCT TCGGGGTCAC CATAGACGAT
CTGATTTCCT ATGATAAAAA GAATGAAGAT AATCTAGGAC TGGGCGTTCC GCCAAAAGGA
AAGCACATTT TCGGAATGGT CAAGGTTGGT GATAAGGGGC AGATTGTGAT CCCTGTCAAA
GCCCGTCAGG TATTTAATAT TAATCCCGGG GACAGTATTA TTGTGCTGGG AGACGAAGAA
CAGGGCATTG CTTTGATCAA GGAAAAAGGA ATTTTGGAAA TGCTGAATTC AGCGATGAAG
ATGAAATGA
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| Protein sequence | MSFAENLVEL RKYHDFSQEE LADMIGVSRQ TLSKYETGES LPDIEKCKRF ANVFGVTIDD
LISYDKKNED NLGLGVPPKG KHIFGMVKVG DKGQIVIPVK ARQVFNINPG DSIIVLGDEE
QGIALIKEKG ILEMLNSAMK MK
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