Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0703 |
Symbol | |
ID | 2739825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 738056 |
End bp | 738280 |
Gene Length | 225 bp |
Protein Length | 74 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637159578 |
Product | AbrB family transcriptional regulator |
Protein accession | NP_971315 |
Protein GI | 42526217 |
COG category | [K] Transcription |
COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.751889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTATC CAAAAGGAAA ATATGCTTGG ACGGTTAAGG TTGGAGAGAA AGGGCAGTTC GTTATACCTA AAGAAGCCCG TGATGTTTTC AACATTAATC CCGGTGATAC CTTGATTGTT TTGGGAGATA TAAACCAAGG CATCGCCATT CCGCCTAAAA ATATGTTCAC AAGTATTATT GACAATATTT TCGGAGGTAA TGTACCAAAG GAGGACGAAG AATGA
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Protein sequence | MGYPKGKYAW TVKVGEKGQF VIPKEARDVF NINPGDTLIV LGDINQGIAI PPKNMFTSII DNIFGGNVPK EDEE
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