Gene Shel_11380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11380 
Symbol 
ID8395029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1297601 
End bp1297810 
Gene Length210 bp 
Protein Length69 aa 
Translation table11 
GC content61% 
IMG OID644985896 
Producttranscriptional regulator, AbrB family 
Protein accessionYP_003143522 
Protein GI257063850 
COG category[K] Transcription 
COG ID[COG2002] Regulators of stationary/sporulation gene expression 
TIGRFAM ID[TIGR01439] looped-hinge helix DNA binding domain, AbrB family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATGC CTGAGGGCAA GGGGGCTTGG ACGGCGACGG TCGGTGCCAA GGGGCAGATC 
GTCATTCCCA AAGAGGCGCG CGACATGTTC GGCATCAAGC CTGGTGACAC GCTTATCATT
CTGGGAGACG TCGAGCGCGG CCTCGCCATT CCGCCCAAGG AGCAGTTCGA CGGATGGATC
AAAGCGGTGT TCGAAGGGGA CAGGCGATGA
 
Protein sequence
MEMPEGKGAW TATVGAKGQI VIPKEARDMF GIKPGDTLII LGDVERGLAI PPKEQFDGWI 
KAVFEGDRR