15 homologs were found in PanDaTox collection
for query gene Sterm_1868 on replicon NC_013517
Organism: Sebaldella termitidis ATCC 33386



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013517  Sterm_1868  transcriptional regulator, AbrB family  100 
 
 		 75 aa  150  5e-36  Sebaldella termitidis ATCC 33386  Bacteria  unclonable  0.0000000000975401  n/a   
 
 
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NC_011830  Dhaf_1655  transcriptional regulator, AbrB family  59.72 
 
 		 79 aa  91.7  4e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.336851  n/a   
 
 
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NC_002967  TDE0703  AbrB family transcriptional regulator  58.11 
 
 		 74 aa  90.5  7e-18  Treponema denticola ATCC 35405  Bacteria  normal  0.751889  n/a   
 
 
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NC_013165  Shel_11380  transcriptional regulator, AbrB family  58.46 
 
 		 69 aa  82  0.000000000000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009712  Mboo_2181  AbrB family transcriptional regulator  54.84 
 
 		 92 aa  72  0.000000000003  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.0824965  normal  1 
 
 
-
 
NC_002967  TDE0344  AbrB family transcriptional regulator  56.25 
 
 		 73 aa  71.2  0.000000000004  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009051  Memar_0329  AbrB family transcriptional regulator  67.35 
 
 		 86 aa  71.6  0.000000000004  Methanoculleus marisnigri JR1  Archaea  normal  0.485621  n/a   
 
 
-
 
NC_013165  Shel_25910  looped-hinge helix DNA binding domain, AbrB family  55.56 
 
 		 144 aa  63.9  0.0000000006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013203  Apar_0844  transcriptional regulator, XRE family  51.92 
 
 		 142 aa  61.2  0.000000004  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  0.0958964 
 
 
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NC_013517  Sterm_0118  transcriptional regulator, AbrB family  44.78 
 
 		 70 aa  55.1  0.0000003  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_0985  transcriptional regulator, AbrB family  45.45 
 
 		 95 aa  50.1  0.00001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  decreased coverage  0.00370764  normal  1 
 
 
-
 
NC_002936  DET1616  AbrB family transcriptional regulator  38.6 
 
 		 90 aa  47  0.00009  Dehalococcoides ethenogenes 195  Bacteria  normal  0.345256  n/a   
 
 
-
 
NC_011661  Dtur_0060  transcriptional regulator, AbrB family  41.07 
 
 		 81 aa  46.6  0.0001  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.0000160272  n/a   
 
 
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NC_009455  DehaBAV1_1362  hypothetical protein  36.84 
 
 		 90 aa  45.8  0.0002  Dehalococcoides sp. BAV1  Bacteria  normal  0.787025  n/a   
 
 
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NC_013552  DhcVS_1498  transcriptional regulator, AbrB family  36.84 
 
 		 90 aa  45.4  0.0002  Dehalococcoides sp. VS  Bacteria  normal  0.794693  n/a   
 
 
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