15 homologs were found in PanDaTox collection
for query gene DhcVS_1498 on replicon NC_013552
Organism: Dehalococcoides sp. VS



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013552  DhcVS_1498  transcriptional regulator, AbrB family  100 
 
 		 90 aa  184  5e-46  Dehalococcoides sp. VS  Bacteria  normal  0.794693  n/a   
 
 
-
 
NC_002936  DET1616  AbrB family transcriptional regulator  95.56 
 
 		 90 aa  178  2e-44  Dehalococcoides ethenogenes 195  Bacteria  normal  0.345256  n/a   
 
 
-
 
NC_009455  DehaBAV1_1362  hypothetical protein  93.33 
 
 		 90 aa  173  7e-43  Dehalococcoides sp. BAV1  Bacteria  normal  0.787025  n/a   
 
 
-
 
NC_013203  Apar_0844  transcriptional regulator, XRE family  53.33 
 
 		 142 aa  53.1  0.000001  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  0.0958964 
 
 
-
 
NC_014210  Ndas_0985  transcriptional regulator, AbrB family  46 
 
 		 95 aa  52  0.000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  decreased coverage  0.00370764  normal  1 
 
 
-
 
NC_011661  Dtur_0060  transcriptional regulator, AbrB family  28.79 
 
 		 81 aa  49.3  0.00002  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.0000160272  n/a   
 
 
-
 
NC_009712  Mboo_2181  AbrB family transcriptional regulator  40 
 
 		 92 aa  47.8  0.00006  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.0824965  normal  1 
 
 
-
 
NC_009051  Memar_0329  AbrB family transcriptional regulator  37.5 
 
 		 86 aa  47.4  0.00007  Methanoculleus marisnigri JR1  Archaea  normal  0.485621  n/a   
 
 
-
 
NC_002967  TDE0344  AbrB family transcriptional regulator  39.66 
 
 		 73 aa  47  0.00009  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013165  Shel_25910  looped-hinge helix DNA binding domain, AbrB family  32.79 
 
 		 144 aa  45.8  0.0002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013517  Sterm_1868  transcriptional regulator, AbrB family  36.84 
 
 		 75 aa  45.4  0.0002  Sebaldella termitidis ATCC 33386  Bacteria  unclonable  0.0000000000975401  n/a   
 
 
-
 
NC_013411  GYMC61_1521  transcriptional regulator, AbrB family  32.26 
 
 		 97 aa  43.9  0.0008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013165  Shel_11380  transcriptional regulator, AbrB family  46.81 
 
 		 69 aa  42.7  0.002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1655  transcriptional regulator, AbrB family  54.55 
 
 		 79 aa  40.8  0.006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.336851  n/a   
 
 
-
 
NC_002967  TDE0703  AbrB family transcriptional regulator  54.55 
 
 		 74 aa  40  0.01  Treponema denticola ATCC 35405  Bacteria  normal  0.751889  n/a   
 
 
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