| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0329 |
|---|
| Symbol | |
|---|
| ID | 4847248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 309603 |
|---|
| End bp | 309863 |
|---|
| Gene Length | 261 bp |
|---|
| Protein Length | 86 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640115003 |
|---|
| Product | AbrB family transcriptional regulator |
|---|
| Protein accession | YP_001046244 |
|---|
| Protein GI | 126178279 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.485621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCACA ACCACCACCA CCGCCACGAC CACAGCGGCA GAAAACACAT CTTCGGGACG
GTCAAGGTCG GCGAACGCGG CCAGATTGTC ATCCCGAAAG AAGCGCGCGA GATCTTCGAT
ATCAAGCCCG GCGACACGCT GATGGTTCTC GGCGACGAGG GGCGCGGGCT TGCCGTCGTC
AAAGCGGATA AATTCCGGCG GATAGCAGAG GAGATGCTCC GGATGTTCGA GGTTGAACCC
GAGGAGCCGC CGGAGGAGTG A
|
|---|
| Protein sequence | MFHNHHHRHD HSGRKHIFGT VKVGERGQIV IPKEAREIFD IKPGDTLMVL GDEGRGLAVV
KADKFRRIAE EMLRMFEVEP EEPPEE
|
|---|
| |