20 homologs were found in PanDaTox collection
for query gene Dhaf_1655 on replicon NC_011830
Organism: Desulfitobacterium hafniense DCB-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011830  Dhaf_1655  transcriptional regulator, AbrB family  100 
 
 
79 aa  160  6e-39  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.336851  n/a   
 
 
-
 
NC_002967  TDE0703  AbrB family transcriptional regulator  69.86 
 
 
74 aa  108  2.0000000000000002e-23  Treponema denticola ATCC 35405  Bacteria  normal  0.751889  n/a   
 
 
-
 
NC_013517  Sterm_1868  transcriptional regulator, AbrB family  59.72 
 
 
75 aa  91.7  3e-18  Sebaldella termitidis ATCC 33386  Bacteria  unclonable  0.0000000000975401  n/a   
 
 
-
 
NC_013165  Shel_11380  transcriptional regulator, AbrB family  61.76 
 
 
69 aa  88.6  3e-17  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_009051  Memar_0329  AbrB family transcriptional regulator  68 
 
 
86 aa  73.2  0.000000000001  Methanoculleus marisnigri JR1  Archaea  normal  0.485621  n/a   
 
 
-
 
NC_013165  Shel_25910  looped-hinge helix DNA binding domain, AbrB family  50 
 
 
144 aa  68.9  0.00000000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_002967  TDE0344  AbrB family transcriptional regulator  53.57 
 
 
73 aa  68.6  0.00000000003  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_2181  AbrB family transcriptional regulator  50.79 
 
 
92 aa  68.2  0.00000000003  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.0824965  normal 
 
 
-
 
NC_013203  Apar_0844  transcriptional regulator, XRE family  54.84 
 
 
142 aa  65.9  0.0000000002  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.0958964 
 
 
-
 
NC_013517  Sterm_0118  transcriptional regulator, AbrB family  39.66 
 
 
70 aa  51.2  0.000005  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0985  transcriptional regulator, AbrB family  45.28 
 
 
95 aa  47.4  0.00006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  decreased coverage  0.00370764  normal 
 
 
-
 
NC_007484  Noc_2206  AbrB family transcriptional regulator  38.71 
 
 
80 aa  43.1  0.001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_0388  transcriptional regulator, AbrB family  54.55 
 
 
79 aa  42.4  0.002  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_011661  Dtur_0060  transcriptional regulator, AbrB family  40 
 
 
81 aa  42  0.003  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.0000160272  n/a   
 
 
-
 
NC_009440  Msed_1535  AbrB family transcriptional regulator  51.22 
 
 
79 aa  41.2  0.004  Metallosphaera sedula DSM 5348  Archaea  normal  0.31901  normal  0.0713691 
 
 
-
 
NC_009455  DehaBAV1_1362  hypothetical protein  54.55 
 
 
90 aa  41.2  0.005  Dehalococcoides sp. BAV1  Bacteria  normal  0.787025  n/a   
 
 
-
 
NC_002936  DET1616  AbrB family transcriptional regulator  54.55 
 
 
90 aa  41.2  0.005  Dehalococcoides ethenogenes 195  Bacteria  normal  0.345256  n/a   
 
 
-
 
NC_013552  DhcVS_1498  transcriptional regulator, AbrB family  54.55 
 
 
90 aa  40.8  0.006  Dehalococcoides sp. VS  Bacteria  normal  0.794693  n/a   
 
 
-
 
NC_007796  Mhun_0877  AbrB family transcriptional regulator  34.85 
 
 
99 aa  40.8  0.007  Methanospirillum hungatei JF-1  Archaea  normal  0.282814  normal 
 
 
-
 
NC_007796  Mhun_1186  AbrB family transcriptional regulator  42.86 
 
 
73 aa  40  0.01  Methanospirillum hungatei JF-1  Archaea  normal  0.0409661  normal  0.309987 
 
 
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