More than 300 homologs were found in PanDaTox collection
for query gene Rpic_0104 on replicon NC_010682
Organism: Ralstonia pickettii 12J



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012856  Rpic12D_0111  acyl-CoA dehydrogenase domain protein  94.53 
 
 
384 aa  743    Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0104  acyl-CoA dehydrogenase domain protein  100 
 
 
384 aa  781    Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5206  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  66.84 
 
 
387 aa  516  1.0000000000000001e-145  Ralstonia eutropha JMP134  Bacteria  normal  0.652072  n/a   
 
 
-
 
NC_011004  Rpal_2429  acyl-CoA dehydrogenase domain protein  64.83 
 
 
382 aa  511  1e-144  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.62219  n/a   
 
 
-
 
NC_007778  RPB_3267  Acyl-CoA dehydrogenase-like  64 
 
 
379 aa  499  1e-140  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.691288  normal  0.607013 
 
 
-
 
NC_007958  RPD_2198  acyl-CoA dehydrogenase-like  64.78 
 
 
379 aa  499  1e-140  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.583783 
 
 
-
 
NC_009485  BBta_0668  putative acyl-CoA dehydrogenase  61.64 
 
 
379 aa  494  1e-139  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.11454 
 
 
-
 
NC_008786  Veis_2210  acyl-CoA dehydrogenase domain-containing protein  63.93 
 
 
382 aa  487  1e-136  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.766307 
 
 
-
 
NC_009075  BURPS668_A2926  acyl-CoA dehydrogenase  62.89 
 
 
390 aa  475  1e-133  Burkholderia pseudomallei 668  Bacteria  normal  0.532316  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1147  acyl-CoA dehydrogenase  62.89 
 
 
390 aa  475  1e-133  Burkholderia pseudomallei 1710b  Bacteria  normal  0.799274  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2771  acyl-CoA dehydrogenase  62.89 
 
 
390 aa  475  1e-133  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0292  acyl-CoA dehydrogenase  62.63 
 
 
390 aa  472  1e-132  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3506  acyl-CoA dehydrogenase-like  57.48 
 
 
388 aa  430  1e-119  Rhodoferax ferrireducens T118  Bacteria  normal  0.906324  n/a   
 
 
-
 
NC_009656  PSPA7_3798  putative acyl-CoA dehydrogenase  55.61 
 
 
382 aa  413  1e-114  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2640  acyl-CoA dehydrogenase domain-containing protein  53.7 
 
 
382 aa  410  1e-113  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_44590  putative acyl-CoA dehydrogenase  55.61 
 
 
382 aa  409  1e-113  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.115887 
 
 
-
 
NC_007492  Pfl01_1809  Acyl-CoA dehydrogenase-like  54.81 
 
 
382 aa  407  1.0000000000000001e-112  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3438  acyl-CoA dehydrogenase domain-containing protein  50 
 
 
379 aa  387  1e-106  Marinobacter aquaeolei VT8  Bacteria  normal  0.0342749  n/a   
 
 
-
 
NC_009943  Dole_0626  acyl-CoA dehydrogenase domain-containing protein  49.34 
 
 
386 aa  375  1e-103  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.000000265202  n/a   
 
 
-
 
NC_008048  Sala_2313  acyl-CoA dehydrogenase-like protein  53.72 
 
 
391 aa  378  1e-103  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_16500  acyl-CoA dehydrogenase  50.94 
 
 
384 aa  358  6e-98  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4432  acyl-CoA dehydrogenase domain protein  50.14 
 
 
387 aa  351  1e-95  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0429863 
 
 
-
 
NC_013441  Gbro_3830  acyl-CoA dehydrogenase domain protein  48.66 
 
 
386 aa  343  4e-93  Gordonia bronchialis DSM 43247  Bacteria  normal  0.494815  n/a   
 
 
-
 
NC_008726  Mvan_4847  acyl-CoA dehydrogenase domain-containing protein  48.81 
 
 
386 aa  335  9e-91  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.258708 
 
 
-
 
NC_009338  Mflv_4612  acyl-CoA dehydrogenase domain-containing protein  47.55 
 
 
392 aa  330  3e-89  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4326  acyl-CoA dehydrogenase domain-containing protein  46.81 
 
 
388 aa  328  1.0000000000000001e-88  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0122368 
 
 
-
 
NC_009953  Sare_4766  acyl-CoA dehydrogenase domain-containing protein  46.86 
 
 
394 aa  328  1.0000000000000001e-88  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000278675 
 
 
-
 
NC_008699  Noca_4554  acyl-CoA dehydrogenase domain-containing protein  48.64 
 
 
386 aa  326  5e-88  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_10993  acyl-CoA dehydrogenase fadE13  48.53 
 
 
382 aa  320  1.9999999999999998e-86  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000447194  normal  0.375388 
 
 
-
 
NC_008705  Mkms_3243  acyl-CoA dehydrogenase domain-containing protein  45.08 
 
 
399 aa  320  3.9999999999999996e-86  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3181  acyl-CoA dehydrogenase-like protein  45.08 
 
 
399 aa  320  3.9999999999999996e-86  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3193  acyl-CoA dehydrogenase domain-containing protein  45.08 
 
 
399 aa  318  7e-86  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2827  acyl-CoA dehydrogenase domain protein  46.15 
 
 
391 aa  318  7.999999999999999e-86  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.226434  n/a   
 
 
-
 
NC_008705  Mkms_4391  acyl-CoA dehydrogenase domain-containing protein  47.45 
 
 
382 aa  311  1e-83  Mycobacterium sp. KMS  Bacteria  normal  0.224235  normal 
 
 
-
 
NC_008146  Mmcs_4305  acyl-CoA dehydrogenase-like protein  47.45 
 
 
382 aa  311  1e-83  Mycobacterium sp. MCS  Bacteria  normal  0.355626  n/a   
 
 
-
 
NC_009077  Mjls_4685  acyl-CoA dehydrogenase domain-containing protein  47.45 
 
 
382 aa  310  2e-83  Mycobacterium sp. JLS  Bacteria  normal  normal  0.561933 
 
 
-
 
NC_009338  Mflv_1884  acyl-CoA dehydrogenase domain-containing protein  46.38 
 
 
382 aa  303  3.0000000000000004e-81  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0914316 
 
 
-
 
BN001307  ANIA_01699  acyl-CoA dehydrogenase, putative (AFU_orthologue; AFUA_4G08490)  39.81 
 
 
564 aa  298  1e-79  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.0281763 
 
 
-
 
NC_009675  Anae109_1179  acyl-CoA dehydrogenase domain-containing protein  44.27 
 
 
381 aa  289  6e-77  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.532385 
 
 
-
 
NC_013739  Cwoe_1590  acyl-CoA dehydrogenase domain protein  40.96 
 
 
396 aa  287  2e-76  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.663907 
 
 
-
 
NC_007950  Bpro_5265  acyl-CoA dehydrogenase-like  41.6 
 
 
381 aa  287  2.9999999999999996e-76  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009375  OSTLU_36653  predicted protein  40.61 
 
 
429 aa  285  1.0000000000000001e-75  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.022493  hitchhiker  0.00305491 
 
 
-
 
NC_009367  OSTLU_41633  predicted protein  40.61 
 
 
429 aa  285  1.0000000000000001e-75  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.0953919 
 
 
-
 
NC_011891  A2cp1_1261  acyl-CoA dehydrogenase domain protein  42.82 
 
 
385 aa  277  2e-73  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.403217  n/a   
 
 
-
 
NC_007951  Bxe_A2768  putative acyl-CoA dehydrogenase, long- chain specific  40.9 
 
 
391 aa  278  2e-73  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.466839 
 
 
-
 
NC_007760  Adeh_1132  Acyl-CoA dehydrogenase, type 1  42.29 
 
 
385 aa  275  9e-73  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1192  acyl-CoA dehydrogenase domain protein  42.55 
 
 
385 aa  275  1.0000000000000001e-72  Anaeromyxobacter sp. K  Bacteria  normal  0.0644386  n/a   
 
 
-
 
NC_009972  Haur_4761  acyl-CoA dehydrogenase domain-containing protein  39.63 
 
 
386 aa  268  1e-70  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_00085  probable acyl-CoA dehydrogenase  35.12 
 
 
386 aa  268  1e-70  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
BN001305  ANIA_05270  acyl-CoA dehydrogenase (AFU_orthologue; AFUA_2G16630)  37.37 
 
 
425 aa  264  2e-69  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.85359  normal 
 
 
-
 
NC_009921  Franean1_4286  acyl-CoA dehydrogenase domain-containing protein  39.73 
 
 
379 aa  264  2e-69  Frankia sp. EAN1pec  Bacteria  normal  normal  0.330894 
 
 
-
 
NC_010678  Rpic_4927  acyl-CoA dehydrogenase domain protein  40.96 
 
 
380 aa  259  6e-68  Ralstonia pickettii 12J  Bacteria  normal  normal  0.905693 
 
 
-
 
NC_012857  Rpic12D_3850  acyl-CoA dehydrogenase domain protein  40.96 
 
 
380 aa  259  6e-68  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5007  acyl-CoA dehydrogenase  38.64 
 
 
378 aa  253  3e-66  Pseudomonas aeruginosa PA7  Bacteria  normal  0.284133  n/a   
 
 
-
 
NC_009074  BURPS668_0071  acyl-CoA dehydrogenase  39.74 
 
 
378 aa  253  4.0000000000000004e-66  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0285  putative acyl-CoA dehydrogenase  39.74 
 
 
430 aa  252  8.000000000000001e-66  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0060  acyl-CoA dehydrogenase  39.21 
 
 
378 aa  251  1e-65  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1825  acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  39.47 
 
 
378 aa  251  2e-65  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3482  long-chain specific acyl-CoA dehydrogenase  39.47 
 
 
378 aa  251  2e-65  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2118  acyl-CoA dehydrogenase domain-containing protein  37.6 
 
 
380 aa  251  2e-65  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.438957 
 
 
-
 
NC_009080  BMA10247_2728  long-chain specific acyl-CoA dehydrogenase  39.47 
 
 
378 aa  251  2e-65  Burkholderia mallei NCTC 10247  Bacteria  normal  0.890874  n/a   
 
 
-
 
NC_008726  Mvan_4587  acyl-CoA dehydrogenase domain-containing protein  37.87 
 
 
380 aa  250  3e-65  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_0069  acyl-CoA dehydrogenase  40.11 
 
 
378 aa  250  4e-65  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1015  acyl-CoA dehydrogenase domain-containing protein  37.93 
 
 
381 aa  249  7e-65  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.629454 
 
 
-
 
NC_013411  GYMC61_2106  acyl-CoA dehydrogenase domain protein  36.83 
 
 
381 aa  246  4.9999999999999997e-64  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013757  Gobs_3923  acyl-CoA dehydrogenase domain protein  37.77 
 
 
381 aa  244  9.999999999999999e-64  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0898  acyl-CoA dehydrogenase domain-containing protein  37.47 
 
 
379 aa  244  1.9999999999999999e-63  Pseudomonas mendocina ymp  Bacteria  normal  0.592416  normal 
 
 
-
 
NC_009565  TBFG_12737  acyl-CoA dehydrogenase fadE20  36.9 
 
 
386 aa  242  7e-63  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.416268 
 
 
-
 
NC_007492  Pfl01_4696  Acyl-CoA dehydrogenase-like  36.94 
 
 
378 aa  242  7.999999999999999e-63  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0700778  normal  0.0611001 
 
 
-
 
NC_009077  Mjls_4308  acyl-CoA dehydrogenase domain-containing protein  36.53 
 
 
380 aa  241  2e-62  Mycobacterium sp. JLS  Bacteria  normal  0.828452  normal 
 
 
-
 
NC_009077  Mjls_4090  acyl-CoA dehydrogenase domain-containing protein  37.5 
 
 
380 aa  241  2e-62  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4164  acyl-CoA dehydrogenase domain protein  38.67 
 
 
380 aa  241  2e-62  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_4154  acyl-CoA dehydrogenase domain-containing protein  36.53 
 
 
380 aa  241  2e-62  Mycobacterium sp. KMS  Bacteria  normal  normal  0.815208 
 
 
-
 
NC_008146  Mmcs_4078  acyl-CoA dehydrogenase-like protein  36.53 
 
 
380 aa  241  2e-62  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  39.26 
 
 
380 aa  240  2.9999999999999997e-62  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008726  Mvan_2439  long-chain-acyl-CoA dehydrogenase  37.33 
 
 
391 aa  240  2.9999999999999997e-62  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0991983  normal  0.0569635 
 
 
-
 
NC_007348  Reut_B4166  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  39.68 
 
 
379 aa  240  4e-62  Ralstonia eutropha JMP134  Bacteria  normal  0.503131  n/a   
 
 
-
 
NC_007908  Rfer_2817  acyl-CoA dehydrogenase-like  36.78 
 
 
383 aa  239  4e-62  Rhodoferax ferrireducens T118  Bacteria  normal  0.0246434  n/a   
 
 
-
 
NC_012793  GWCH70_1226  acyl-CoA dehydrogenase domain protein  34.47 
 
 
381 aa  239  5.999999999999999e-62  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5486  acyl-CoA dehydrogenase domain protein  36.44 
 
 
381 aa  239  8e-62  Haliangium ochraceum DSM 14365  Bacteria  normal  0.361587  normal  0.275815 
 
 
-
 
NC_013159  Svir_24700  acyl-CoA dehydrogenase  38.48 
 
 
373 aa  238  9e-62  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.791758  normal 
 
 
-
 
NC_008786  Veis_2938  acyl-CoA dehydrogenase domain-containing protein  39.42 
 
 
379 aa  238  1e-61  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.282109  normal 
 
 
-
 
NC_013510  Tcur_1158  acyl-CoA dehydrogenase domain protein  37.23 
 
 
380 aa  237  2e-61  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0271  acyl-CoA dehydrogenase domain-containing protein  37.4 
 
 
381 aa  238  2e-61  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0120  acyl-CoA dehydrogenase domain protein  35.92 
 
 
384 aa  236  3e-61  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  36.53 
 
 
376 aa  237  3e-61  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  36.53 
 
 
376 aa  237  3e-61  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  38.99 
 
 
379 aa  236  3e-61  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3613  acyl-CoA dehydrogenase domain-containing protein  38.13 
 
 
382 aa  237  3e-61  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2684  putative acyl-CoA dehydrogenase  39.3 
 
 
375 aa  236  4e-61  Pseudomonas aeruginosa PA7  Bacteria  normal  0.126402  n/a   
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  36.53 
 
 
376 aa  236  4e-61  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  36.53 
 
 
376 aa  236  4e-61  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0858  butyryl-CoA dehydrogenase  38.38 
 
 
380 aa  236  4e-61  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.661231  n/a   
 
 
-
 
NC_008228  Patl_0315  acyl-CoA dehydrogenase-like  35.71 
 
 
391 aa  236  4e-61  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_1546  acyl-CoA dehydrogenase domain-containing protein  37.84 
 
 
378 aa  236  4e-61  Maricaulis maris MCS10  Bacteria  normal  0.295515  normal 
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  36.27 
 
 
376 aa  236  5.0000000000000005e-61  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0526  acyl-CoA dehydrogenase domain-containing protein  36.87 
 
 
381 aa  236  5.0000000000000005e-61  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0149792 
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  36.53 
 
 
381 aa  236  5.0000000000000005e-61  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_49080  putative acyl-CoA dehydrogenase  39.41 
 
 
379 aa  236  5.0000000000000005e-61  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000217438 
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  36.53 
 
 
376 aa  236  6e-61  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
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