18 homologs were found in PanDaTox collection
for query gene RSP_4073 on replicon NC_007489
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007489  RSP_4073  XRE family transcriptional regulator  100 
 
 		 141 aa  280  3.0000000000000004e-75  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
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NC_008532  STER_0918  XRE family transcriptional regulator  39.24 
 
 		 229 aa  53.5  0.000001  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.0000791351  n/a   
 
 
-
 
NC_013595  Sros_6481  putative transcriptional regulator, XRE family  50 
 
 		 291 aa  45.4  0.0003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.787196  normal  0.247273 
 
 
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NC_014148  Plim_3645  helix-turn-helix domain protein  40 
 
 		 143 aa  43.5  0.0009  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
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NC_013203  Apar_1254  transcriptional regulator, XRE family  36.36 
 
 		 364 aa  43.1  0.001  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013385  Adeg_0117  transcriptional regulator, XRE family  38.18 
 
 		 118 aa  42.4  0.002  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
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NC_008531  LEUM_0099  XRE-family DNA-binding domain-containing protein  33.93 
 
 		 296 aa  42.4  0.002  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  1  n/a   
 
 
-
 
NC_007794  Saro_3015  putative prophage repressor  40.38 
 
 		 227 aa  42  0.003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0239  XRE family transcriptional regulator  34.18 
 
 		 115 aa  41.6  0.004  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.0000283783  normal  1 
 
 
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NC_009708  YpsIP31758_0337  DNA-binding protein  36.54 
 
 		 135 aa  41.6  0.004  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_007971  Rmet_6072  putative transcriptional regulator Cro/CI family  41.51 
 
 		 233 aa  41.6  0.004  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.406393 
 
 
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NC_009632  SaurJH1_2091  peptidase S24 S26A and S26B  34.48 
 
 		 238 aa  41.2  0.005  Staphylococcus aureus subsp. aureus JH1  Bacteria  hitchhiker  0.0000399055  n/a   
 
 
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NC_009487  SaurJH9_2054  putative phage repressor  34.48 
 
 		 238 aa  41.2  0.005  Staphylococcus aureus subsp. aureus JH9  Bacteria  unclonable  0.000000034182  n/a   
 
 
-
 
NC_007974  Rmet_4110  XRE family transcriptional regulator  35.94 
 
 		 212 aa  41.2  0.005  Cupriavidus metallidurans CH34  Bacteria  normal  0.595211  normal  1 
 
 
-
 
NC_008530  LGAS_0638  XRE family transcriptional regulator  38.6 
 
 		 74 aa  40.8  0.006  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.000000543981  normal  1 
 
 
-
 
NC_008530  LGAS_0576  XRE family transcriptional regulator  38.6 
 
 		 74 aa  40.8  0.006  Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.00000000000016932  normal  0.922143 
 
 
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NC_013165  Shel_15990  predicted transcriptional regulator  36 
 
 		 196 aa  40.8  0.007  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  hitchhiker  0.00000020134 
 
 
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NC_013165  Shel_00980  predicted transcriptional regulator  37.74 
 
 		 459 aa  40  0.01  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.224409  normal  0.709118 
 
 
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