| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0117 |
|---|
| Symbol | |
|---|
| ID | 8490078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 106210 |
|---|
| End bp | 106566 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 646358156 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003238142 |
|---|
| Protein GI | 260892045 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1476] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGGT TCGGAGATAC TCTAAAACAA CTGCGTCAGA GGATGGGCCT CCGACAAGAC
GATGTAGCCA GGATGGTCGG CGTAGAGCGC TCCACTGTAG CCAATTGGGA ACGAGGGGTG
AAGCAACCTA GCCTAGAGAC GCTGGTAAAG CTGAGCCAGT TATTCGGTGT CTCCTTGGAC
GAACTGGTAG GTGTCACCGA GGTTACCACG TCGTCACCTT TATCCCGCTA CTGTTCCCTC
GTCTCCGACC CCTTGGTGAA GCTCTTGGCC GAGCGAACTG GTGTCCCAGC AAAGAACATT
GCAGCCTTTA TTGCAGCACT CCAAGTCTCG GGCGATGCTT GTAGTTGCGA CAGGTAA
|
|---|
| Protein sequence | MIRFGDTLKQ LRQRMGLRQD DVARMVGVER STVANWERGV KQPSLETLVK LSQLFGVSLD
ELVGVTEVTT SSPLSRYCSL VSDPLVKLLA ERTGVPAKNI AAFIAALQVS GDACSCDR
|
|---|
| |