Gene Rmet_6072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_6072 
Symbol 
ID4036548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007971 
Strand
Start bp228036 
End bp228737 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content54% 
IMG OID 
Productputative transcriptional regulator Cro/CI family 
Protein accessionYP_581881 
Protein GI94152474 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.406393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGCA AAAACGCGAT GAAAAGAGCG AGGCGTCTTG CGCGCTTGAC GCAAAGCGAA 
ATTGCAAAGC GGCTCGGCCT GAGCCAATCG ACCTATCACA GGTGGGAGTC CGGCGAGATC
GAGGTTCCAG AGGCGAAGGT GATTTCTCTG TCGGAGGCAC TCGGGGTATC TGTAGAGTAC
TTGCGAGGGC AGCCTGAGCC ATTTGATATC GAGGGAATGG ATGAGCAACT TCCTGCAGAC
AGGAAGAACT ACGGATTCGC AGCGATTCAC TTTAGTACCG GCTGTCCGCC GTTGCTACTG
CCGATATCTG ATGGAGAACG CAGTCGCATC CTGATACAGC TGGATGATGC CGACACGCTA
GGGATTGTCA TCCAATCATT GGATAACAGG ACCGTGTACA TCCGTCGCGC AGCGATGGGC
GACATGTACC TAACCGGCCA TGAAGTGGGC GAGGGTGGGC CAGAGGAATA TGGTGACCAG
TACCTTGGTG TTGCTCCGGA TGATACGTTT TGGAGGATAG TGTCACAACT GGACTCCCCC
CATGATCTTC TGGCGAAGGC TGAATTCACC GAAGAAGAGG TTCTGGCGGT TTTCACTCAT
ATTCGACCAT CCTCGCCCGC TTTGGGCGGG ACGCCTAGCA GAGTTGAATT CGAGGGTTTG
GATTGGGACG CAGTTGTTGC TTCGGTGGAC AAGAAGATCT GA
 
Protein sequence
MVRKNAMKRA RRLARLTQSE IAKRLGLSQS TYHRWESGEI EVPEAKVISL SEALGVSVEY 
LRGQPEPFDI EGMDEQLPAD RKNYGFAAIH FSTGCPPLLL PISDGERSRI LIQLDDADTL
GIVIQSLDNR TVYIRRAAMG DMYLTGHEVG EGGPEEYGDQ YLGVAPDDTF WRIVSQLDSP
HDLLAKAEFT EEEVLAVFTH IRPSSPALGG TPSRVEFEGL DWDAVVASVD KKI