Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3645 |
Symbol | |
ID | 9140363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 4686916 |
End bp | 4687347 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | helix-turn-helix domain protein |
Protein accession | YP_003631656 |
Protein GI | 296123878 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATCC ATTCACAGTT TCGTCTCAGA GGGAAGAACA AAGATTCTTA TCTGGAGCTG ATTCTGGATT TTCCCCTGGC TTCGATCCGA AGTGATGCAC ATCTGGTTGA AGCACAAAAA GTGATCGATG GCCTCTTGGC CCGCGAACGT CTTAACGAGG GTGAAGCGAC TTACCTCGAC GCACTGAGTG ATCTTGTGGA GACCTACGAA GACGAGCATC ATGCCATCGC TCCTGCTACT GATGCCGATC TGCTCCAGCA GCTTCTTGAG GCGAAAGGAT TATCTCAGGC ACAGCTCAGT CGAGAAGCGG GTCTGCCCAG ATCAACGATC TCCGAAGTGC TCAAAGGGAA AAGACGATTC AGCCGACAGA TGATCCACAA GCTGGCCGCC TACTTTCAGA TCGACGCTGC CGTGCTGGCG GTTAACATCT AG
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Protein sequence | MTIHSQFRLR GKNKDSYLEL ILDFPLASIR SDAHLVEAQK VIDGLLARER LNEGEATYLD ALSDLVETYE DEHHAIAPAT DADLLQQLLE AKGLSQAQLS REAGLPRSTI SEVLKGKRRF SRQMIHKLAA YFQIDAAVLA VNI
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