15 homologs were found in PanDaTox collection
for query gene RPD_1772 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007958  RPD_1772  calcium-binding EF-hand  100 
 
 		 254 aa  485  1e-136  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.389103  normal  0.418687 
 
 
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NC_011004  Rpal_4339  putative signal transduction protein with EFhand domain  61.92 
 
 		 256 aa  217  2e-55  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.1378  n/a   
 
 
-
 
NC_007778  RPB_3688  signal transduction protein  64.34 
 
 		 252 aa  175  5e-43  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_1615  calcium-binding EF-hand  61.22 
 
 		 262 aa  144  1e-33  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.959507  normal  1 
 
 
-
 
NC_009485  BBta_5331  calcium-binding domain-containing protein  52.38 
 
 		 256 aa  140  9.999999999999999e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0194602  normal  0.50977 
 
 
-
 
NC_009719  Plav_0950  signal transduction protein  36.36 
 
 		 242 aa  56.2  0.0000005  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007005  Psyr_2030  calcium-binding EF-hand  41.79 
 
 		 251 aa  48.9  0.00007  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.139142  normal  0.816592 
 
 
-
 
NC_014210  Ndas_1450  putative signal transduction protein with EFhand domain  29.17 
 
 		 174 aa  47.8  0.0002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.755568  normal  0.113909 
 
 
-
 
NC_013093  Amir_3842  putative signal transduction protein with EFhand domain  32.35 
 
 		 178 aa  46.6  0.0004  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00258503  n/a   
 
 
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NC_009357  OSTLU_24253  predicted protein  32.86 
 
 		 479 aa  44.7  0.002  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.334979  normal  1 
 
 
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NC_014210  Ndas_1449  putative signal transduction protein with EFhand domain  34.78 
 
 		 175 aa  43.9  0.002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.181348 
 
 
-
 
NC_013595  Sros_2609  hypothetical protein  42.31 
 
 		 181 aa  43.5  0.003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.339179  normal  0.690137 
 
 
-
 
NC_009511  Swit_1228  signal transduction protein  32.86 
 
 		 145 aa  43.1  0.004  Sphingomonas wittichii RW1  Bacteria  normal  0.522863  normal  0.321089 
 
 
-
 
NC_009368  OSTLU_42946  predicted protein  32.04 
 
 		 457 aa  42.4  0.007  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  1  normal  0.176816 
 
 
-
 
NC_010814  Glov_1545  Calcium-binding EF-hand-containing protein  34.78 
 
 		 295 aa  42.4  0.007  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
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