| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3842 |
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| Symbol | |
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| ID | 8328034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4506593 |
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| End bp | 4507129 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644944329 |
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| Product | putative signal transduction protein with EFhand domain |
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| Protein accession | YP_003101567 |
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| Protein GI | 256377907 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[R] General function prediction only
[T] Signal transduction mechanisms
[Z] Cytoskeleton |
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| COG ID | [COG5126] Ca2+-binding protein (EF-Hand superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00258503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACTG GCATCATGCA GGAGCGCCTC GAGCGCCGCT TCGACATGTG GGACAGCAAC
CACAACGGCC TCAACGAGCG GTCCGACTAC GAGACCGAGG CGAACAACAT CCTGCGCGCC
TTCGGCGAGG ACGCCTCTAC CCCGCAGGGC AAGGCCCTCA TCAGCTCCTT CACCGCGATG
TTCGAGTACT TCGCGGAGAA GGCGGGCGTC GGCCCGCACG GCGCGATGAA CAAGCAGCAG
TTCATGCAGG TCGTCGAGGC CGAGGTCTTC GAGGGCGGCG ACGCGGGCTT CAGCCGCGCG
GTCCGGCCCA CCATCCAGGC GATCATGAAC CTGATCGACA CCGACGGCGA CGGCCAGATC
AACCCGGTCG AGTTCGAGAA GTACCTGAGG GTCATCGGCG TGGACGACAT GTCCGCGCAG
GAGGCCTTCG CGCAGATCGA CACCGACGGC AACGGGATGC TGTCGATCGA CGAGCTGGTG
GACGCCGTGC GCGCGTACCA CTTCGGCACC CTGGACGTGC CGCTGCTGGG CCGCTGA
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| Protein sequence | MSTGIMQERL ERRFDMWDSN HNGLNERSDY ETEANNILRA FGEDASTPQG KALISSFTAM
FEYFAEKAGV GPHGAMNKQQ FMQVVEAEVF EGGDAGFSRA VRPTIQAIMN LIDTDGDGQI
NPVEFEKYLR VIGVDDMSAQ EAFAQIDTDG NGMLSIDELV DAVRAYHFGT LDVPLLGR
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