13 homologs were found in PanDaTox collection
for query gene Amir_3842 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013093  Amir_3842  putative signal transduction protein with EFhand domain  100 
 
 		 178 aa  367  1e-101  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00258503  n/a   
 
 
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NC_014210  Ndas_1449  putative signal transduction protein with EFhand domain  50.89 
 
 		 175 aa  176  2e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.181348 
 
 
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NC_014210  Ndas_1450  putative signal transduction protein with EFhand domain  44.97 
 
 		 174 aa  147  6e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.755568  normal  0.113909 
 
 
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NC_013947  Snas_3291  putative signal transduction protein with EFhand domain  32.53 
 
 		 187 aa  97.4  9e-20  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.324563 
 
 
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NC_013595  Sros_2609  hypothetical protein  32.34 
 
 		 181 aa  91.7  5e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.339179  normal  0.690137 
 
 
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NC_013947  Snas_0052  putative signal transduction protein with EFhand domain  31.1 
 
 		 186 aa  74.7  0.0000000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
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NC_014210  Ndas_3812  putative signal transduction protein with EFhand domain  25 
 
 		 182 aa  62.8  0.000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.435134  decreased coverage  0.00141788 
 
 
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NC_011884  Cyan7425_2893  Calcium-binding EF-hand-containing protein  23.31 
 
 		 189 aa  57.8  0.00000008  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.815095 
 
 
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NC_009485  BBta_5331  calcium-binding domain-containing protein  35.23 
 
 		 256 aa  54.7  0.0000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0194602  normal  0.50977 
 
 
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NC_007925  RPC_1615  calcium-binding EF-hand  39.62 
 
 		 262 aa  45.8  0.0003  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.959507  normal  1 
 
 
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NC_007958  RPD_1772  calcium-binding EF-hand  33.33 
 
 		 254 aa  44.7  0.0007  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.389103  normal  0.418687 
 
 
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NC_007778  RPB_3688  signal transduction protein  35 
 
 		 252 aa  44.3  0.0009  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
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NC_007333  Tfu_1792  calcium-binding EF-hand  37.5 
 
 		 127 aa  43.1  0.002  Thermobifida fusca YX  Bacteria  normal  0.654871  n/a   
 
 
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