| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4339 |
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| Symbol | |
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| ID | 6412023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4665964 |
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| End bp | 4666734 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714221 |
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| Product | putative signal transduction protein with EFhand domain |
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| Protein accession | YP_001993310 |
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| Protein GI | 192292705 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[R] General function prediction only
[T] Signal transduction mechanisms
[Z] Cytoskeleton |
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| COG ID | [COG5126] Ca2+-binding protein (EF-Hand superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.1378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCCTG CCATTGGCGC GCTGGGCGCG CTGTCCGGAC TGCTCAATAC GCTGAGCTCG
ACGTCGAAAT CGTCGTCGCA GACCACCAGC TTCACCAACC CGTTCGCCAG CTCGAGCAGC
AGCACGAGCA CGTCGTCGTT CCCGACCCTG TCGACCAGCG GCACCGGCTC GTTTCCGTCG
AGCGGGCTGT CGCAGGAGAC CATGCAGGCG CTGCTCGATG CGCAAAGCCA GCAGTCGACC
TCCAGCTCCA GCTCGACCGC CTCGAAGACC CGCGATTCCG CGCTGAAGGA TCTGTTCAAG
CAGATCGACG CCGACAGCGA TGGCTCGATC ACCAAGAGCG AATTCGAGAA CGCGCTCGGC
GCCGGCGGCA CCAATGTCGC CAATGCCGAC AAGGTGTTCG GCAAGATGGA CGCCAACAAC
GACGGCAAGG TCAGCATGGA CGAGATGTCC TCGGCGCTGA AGAGCGGCCG TCGGCATCAC
GCCCATGGCG GCGGTGGTGC GAACGGTGGC AACGGCGGTG GCGGTGGCAG CAGCGATCCG
CTGCTGCAGG CGCTGTCGGG CTCGTCCTCG ACCAGCGTCA CCAATTCCGA TGGCAGCGTG
ACCACCTCCG TCACCTACTC CGACGGCAGC AAAGTGACGA TGACGTCGGC GGCGACCGGC
TCGTCGTCGA GCAGCGCCAC TTCGTCGTAC AATTTCGTTG AGCAGCTGAT TCAGCGCCAG
GCGTCGCAGA TCCAGGCGGC CTCCGCCAAA TCGCTGTCGG TCAGCGCCTG A
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| Protein sequence | MLPAIGALGA LSGLLNTLSS TSKSSSQTTS FTNPFASSSS STSTSSFPTL STSGTGSFPS
SGLSQETMQA LLDAQSQQST SSSSSTASKT RDSALKDLFK QIDADSDGSI TKSEFENALG
AGGTNVANAD KVFGKMDANN DGKVSMDEMS SALKSGRRHH AHGGGGANGG NGGGGGSSDP
LLQALSGSSS TSVTNSDGSV TTSVTYSDGS KVTMTSAATG SSSSSATSSY NFVEQLIQRQ
ASQIQAASAK SLSVSA
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