| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1772 |
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| Symbol | |
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| ID | 4022254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1987483 |
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| End bp | 1988247 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637961966 |
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| Product | calcium-binding EF-hand |
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| Protein accession | YP_568909 |
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| Protein GI | 91976250 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.389103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.418687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGCCAG CCCTTGGCGC GCTGGGTGCG CTGTCCGGAT TGCTCAATTC GCTGAGTTCG
TCGTCGTCGT CGAAGGCATC GGCGAAGACC ACCAGCCTGA CCAACCCGTT CGAATCCTCC
AGCTCGAACC CCAGCTCCAG CAGCAATGCG CTGCAGGGCT CGTCCGGCAG CAACAGCGCG
TTTCCATCGA GCGGCCTGTC GCCCGAGGTC CTGAAGGCGC TGCTTGCCGC GCAACAGAAC
CAGGCCTCGA CGAGCGATCC GTCGACCACC GCCACGAAGA GCCGCGACGC CGCGCTGAAG
GATTTGTTCT CGCAGCTCGA TGGCGACGGC GACGGCGCGA TCAGCAAGGC CGAATTCGAG
GACAAGCTCG GCGCCGGCGG CACCAATATC AGCAATGCCG ACAAGGTGTT CGCCAAACTC
GATAGCAATG GCGACGGCTC GGTCCGTCTC AACGAACTGT CGTCGGCGTT GAAACCGGGC
AAGGGCCATC ATCACGGGAA GGACGGCGGC AATCCCGGCG GTGGCTCCAG CGATCCGCTG
ATGCAGGCGC TGTCAGGCTC GTCGTCGACC AGCGTGAAAA ACGCAGACGG CACGGTGACG
ACCTCGATCA CCTATGCGGA CGGCTCCAAA GTATCGATGA CGTCGGCTGC GGGCGCGAGC
AGTTCGAGCG CGACGTCGTC CTACAATTTC GTCGAGCAAC TGATCCAGCG TCAGGCAGCG
CATCTGCAGA GCGCTACGGC GTCCTCGCTG TCGGTCAGCG CCTAG
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| Protein sequence | MMPALGALGA LSGLLNSLSS SSSSKASAKT TSLTNPFESS SSNPSSSSNA LQGSSGSNSA
FPSSGLSPEV LKALLAAQQN QASTSDPSTT ATKSRDAALK DLFSQLDGDG DGAISKAEFE
DKLGAGGTNI SNADKVFAKL DSNGDGSVRL NELSSALKPG KGHHHGKDGG NPGGGSSDPL
MQALSGSSST SVKNADGTVT TSITYADGSK VSMTSAAGAS SSSATSSYNF VEQLIQRQAA
HLQSATASSL SVSA
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