Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1228 |
Symbol | |
ID | 5197468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 1385541 |
End bp | 1385978 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640580775 |
Product | signal transduction protein |
Protein accession | YP_001261731 |
Protein GI | 148554149 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.522863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.321089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCGAT ATCTGGCGGG TGCGGCCGGC GGGCTGTTGC TGGCGGGCGG CGGCGTGATG CTGTGGCAGG GACAGGGCAA GGGCCCGCAG CTCGCCGCCG CCCCGCTCCA GGCCGCCGAG CCCGCGCCGC TCGTCGAGCC GCCCGCCGCG ACCGAGAAGA CCCGCGAGGA GAAGCGCTTC GCCCGCTACG ACAAGGACAG GGACGGCAAG GTCAGCCGCG AGGAATTCCT CGCCAGCCGG CGCAAGGCCT ATGCCAAGCT CGACAGCAAC GGCGACGGCC GGCTGAGCTT CGAGGAATGG TCGGCCAAGA CCACCGACCG CTTCGCCAAG GCCGACGCCG ACAAATCGGC GACGCTGACC GCCGAGGAGT TCGCCACCAC CCGCATCGCC CGCAAGACGA CCCGTCCGGC GCCGTGCGTG CCGGAAAGCG AGGGCTGA
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Protein sequence | MWRYLAGAAG GLLLAGGGVM LWQGQGKGPQ LAAAPLQAAE PAPLVEPPAA TEKTREEKRF ARYDKDRDGK VSREEFLASR RKAYAKLDSN GDGRLSFEEW SAKTTDRFAK ADADKSATLT AEEFATTRIA RKTTRPAPCV PESEG
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