Gene Swit_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1228 
Symbol 
ID5197468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1385541 
End bp1385978 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content72% 
IMG OID640580775 
Productsignal transduction protein 
Protein accessionYP_001261731 
Protein GI148554149 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.522863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.321089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGAT ATCTGGCGGG TGCGGCCGGC GGGCTGTTGC TGGCGGGCGG CGGCGTGATG 
CTGTGGCAGG GACAGGGCAA GGGCCCGCAG CTCGCCGCCG CCCCGCTCCA GGCCGCCGAG
CCCGCGCCGC TCGTCGAGCC GCCCGCCGCG ACCGAGAAGA CCCGCGAGGA GAAGCGCTTC
GCCCGCTACG ACAAGGACAG GGACGGCAAG GTCAGCCGCG AGGAATTCCT CGCCAGCCGG
CGCAAGGCCT ATGCCAAGCT CGACAGCAAC GGCGACGGCC GGCTGAGCTT CGAGGAATGG
TCGGCCAAGA CCACCGACCG CTTCGCCAAG GCCGACGCCG ACAAATCGGC GACGCTGACC
GCCGAGGAGT TCGCCACCAC CCGCATCGCC CGCAAGACGA CCCGTCCGGC GCCGTGCGTG
CCGGAAAGCG AGGGCTGA
 
Protein sequence
MWRYLAGAAG GLLLAGGGVM LWQGQGKGPQ LAAAPLQAAE PAPLVEPPAA TEKTREEKRF 
ARYDKDRDGK VSREEFLASR RKAYAKLDSN GDGRLSFEEW SAKTTDRFAK ADADKSATLT
AEEFATTRIA RKTTRPAPCV PESEG