222 homologs were found in PanDaTox collection
for query gene RPB_0992 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007778  RPB_0992  Acyl-CoA dehydrogenase-like  100 
 
 
408 aa  830    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.297365 
 
 
-
 
NC_007958  RPD_1095  acyl-CoA dehydrogenase-like  88.73 
 
 
408 aa  726    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5079  Acyl-CoA dehydrogenase type 2 domain  81.66 
 
 
409 aa  645    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4418  acyl-CoA dehydrogenase domain protein  66.48 
 
 
402 aa  486  1e-136  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.584473  n/a   
 
 
-
 
NC_010511  M446_3403  acyl-CoA dehydrogenase type 2  65.75 
 
 
409 aa  473  1e-132  Methylobacterium sp. 4-46  Bacteria  normal  0.0408106  normal  0.104533 
 
 
-
 
NC_011757  Mchl_5058  acyl-CoA dehydrogenase domain protein  62.15 
 
 
400 aa  455  1e-127  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.418777 
 
 
-
 
NC_010172  Mext_4597  acyl-CoA dehydrogenase domain-containing protein  62.15 
 
 
400 aa  456  1e-127  Methylobacterium extorquens PA1  Bacteria  normal  0.419077  normal  0.111113 
 
 
-
 
NC_009667  Oant_1476  acyl-CoA dehydrogenase protein  48.68 
 
 
390 aa  359  6e-98  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_4124  acyl-CoA dehydrogenase domain protein  47.69 
 
 
393 aa  359  6e-98  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.993047 
 
 
-
 
NC_011369  Rleg2_3795  acyl-CoA dehydrogenase domain protein  47.69 
 
 
393 aa  358  9.999999999999999e-98  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  hitchhiker  0.00013086  normal  0.344818 
 
 
-
 
NC_011988  Avi_6022  acyl-CoA dehydrogenase  47.21 
 
 
399 aa  332  9e-90  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5837  acyl-CoA dehydrogenase-like protein  46.15 
 
 
400 aa  322  5e-87  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0185  acyl-CoA dehydrogenase domain-containing protein  48.15 
 
 
387 aa  320  1.9999999999999998e-86  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5361  putative acyl-CoA dehydrogenase  45.45 
 
 
402 aa  314  1.9999999999999998e-84  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1718  acyl-CoA dehydrogenase domain protein  43.55 
 
 
428 aa  309  5.9999999999999995e-83  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2526  putative acyl-CoA dehydrogenase  43.78 
 
 
425 aa  301  1e-80  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0280993 
 
 
-
 
NC_007651  BTH_I0531  acyl-CoA dehydrogenase domain-containing protein  43.36 
 
 
407 aa  295  1e-78  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_4153  Acyl-CoA dehydrogenase, type 2-like  43.12 
 
 
398 aa  295  1e-78  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.240401  n/a   
 
 
-
 
NC_008543  Bcen2424_4213  acyl-CoA dehydrogenase type 2  43.12 
 
 
398 aa  295  1e-78  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.353379 
 
 
-
 
NC_010515  Bcenmc03_3304  acyl-CoA dehydrogenase type 2  43.12 
 
 
398 aa  295  1e-78  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.890764  normal 
 
 
-
 
NC_007511  Bcep18194_B1805  Acyl-CoA dehydrogenase-like  42.6 
 
 
398 aa  293  4e-78  Burkholderia sp. 383  Bacteria  normal  normal  0.723346 
 
 
-
 
NC_007434  BURPS1710b_0818  acyl-CoA dehydrogenase domain-containing protein  43.75 
 
 
407 aa  292  7e-78  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0641  acyl-CoA dehydrogenase domain-containing protein  43.75 
 
 
407 aa  292  7e-78  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0655  acyl-CoA dehydrogenase domain-containing protein  43.75 
 
 
407 aa  292  7e-78  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0042  acyl-CoA dehydrogenase domain-containing protein  43.48 
 
 
407 aa  290  2e-77  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2888  acyl-CoA dehydrogenase domain-containing protein  43.48 
 
 
407 aa  290  2e-77  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2197  acyl-CoA dehydrogenase domain-containing protein  43.48 
 
 
407 aa  290  2e-77  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2510  acyl-CoA dehydrogenase domain-containing protein  43.48 
 
 
407 aa  290  2e-77  Burkholderia mallei NCTC 10247  Bacteria  normal  0.10491  n/a   
 
 
-
 
NC_010552  BamMC406_4110  acyl-CoA dehydrogenase type 2  42.03 
 
 
398 aa  290  3e-77  Burkholderia ambifaria MC40-6  Bacteria  normal  0.163636  normal 
 
 
-
 
NC_008391  Bamb_3636  acyl-CoA dehydrogenase type 2  41.76 
 
 
398 aa  290  4e-77  Burkholderia ambifaria AMMD  Bacteria  normal  0.556701  normal 
 
 
-
 
NC_010086  Bmul_4392  acyl-CoA dehydrogenase domain-containing protein  41.37 
 
 
398 aa  282  6.000000000000001e-75  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_0166  putative carnitine operon oxidoreductase  37.26 
 
 
395 aa  247  3e-64  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1077  acyl-CoA dehydrogenase domain protein  40.52 
 
 
385 aa  231  2e-59  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_3056  acyl-CoA dehydrogenase domain-containing protein  32.39 
 
 
390 aa  145  9e-34  Salinispora arenicola CNS-205  Bacteria  normal  0.432663  hitchhiker  0.00291671 
 
 
-
 
NC_009380  Strop_0683  acyl-CoA dehydrogenase type 2  31.61 
 
 
385 aa  141  1.9999999999999998e-32  Salinispora tropica CNB-440  Bacteria  normal  0.998366  normal 
 
 
-
 
NC_010338  Caul_2948  acyl-CoA dehydrogenase domain-containing protein  29.51 
 
 
416 aa  80.9  0.00000000000004  Caulobacter sp. K31  Bacteria  normal  0.0471344  normal 
 
 
-
 
NC_009485  BBta_4293  putative Acyl-CoA dehydrogenase  25.46 
 
 
398 aa  70.9  0.00000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  hitchhiker  0.004124 
 
 
-
 
NC_008688  Pden_5014  acyl-CoA dehydrogenase type 2  25.13 
 
 
384 aa  68.9  0.0000000002  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_2643  acyl-CoA dehydrogenase domain protein  24.31 
 
 
371 aa  67.4  0.0000000004  Brachyspira murdochii DSM 12563  Bacteria  normal  0.475979  n/a   
 
 
-
 
NC_008254  Meso_2091  Acyl-CoA dehydrogenase, type 2-like  30.09 
 
 
389 aa  67.8  0.0000000004  Chelativorans sp. BNC1  Bacteria  normal  0.424709  n/a   
 
 
-
 
NC_013132  Cpin_3413  acyl-CoA dehydrogenase domain protein  31.18 
 
 
385 aa  67  0.0000000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.926635  normal  0.183052 
 
 
-
 
NC_012034  Athe_1232  acyl-CoA dehydrogenase domain protein  23.18 
 
 
381 aa  64.3  0.000000003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2695  acyl-CoA dehydrogenase domain protein  28.26 
 
 
382 aa  64.3  0.000000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11696  acyl-CoA dehydrogenase fadE16  27.84 
 
 
373 aa  64.3  0.000000003  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.392207 
 
 
-
 
NC_008726  Mvan_5885  acyl-CoA dehydrogenase domain-containing protein  23.75 
 
 
375 aa  63.9  0.000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.468713 
 
 
-
 
NC_013131  Caci_0550  acyl-CoA dehydrogenase domain protein  23.75 
 
 
377 aa  63.5  0.000000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.193039  decreased coverage  0.00272664 
 
 
-
 
NC_013510  Tcur_1390  Acyl-CoA dehydrogenase type 2 domain protein  26.9 
 
 
384 aa  63.2  0.000000007  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00428618  n/a   
 
 
-
 
NC_007517  Gmet_3306  Acyl-CoA dehydrogenase-like  26.59 
 
 
380 aa  63.2  0.000000008  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1029  acyl-CoA dehydrogenase domain protein  24.34 
 
 
387 aa  63.2  0.000000008  Gordonia bronchialis DSM 43247  Bacteria  normal  0.239684  n/a   
 
 
-
 
NC_013947  Snas_0146  Acyl-CoA dehydrogenase type 2 domain-containing protein  24.17 
 
 
382 aa  63.2  0.000000009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.658373 
 
 
-
 
NC_008726  Mvan_1719  acyl-CoA dehydrogenase domain-containing protein  24.78 
 
 
389 aa  62.8  0.00000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4743  butyryl-CoA dehydrogenase  24.64 
 
 
417 aa  62.4  0.00000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4265  acyl-CoA dehydrogenase type 2  25.77 
 
 
387 aa  61.2  0.00000003  Salinispora tropica CNB-440  Bacteria  normal  normal  0.184931 
 
 
-
 
NC_014158  Tpau_1058  acyl-CoA dehydrogenase domain protein  23.05 
 
 
386 aa  60.5  0.00000005  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.405365  n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  27.67 
 
 
379 aa  59.7  0.00000009  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_008146  Mmcs_1300  acyl-CoA dehydrogenase-like protein  24.35 
 
 
388 aa  59.3  0.0000001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1483  butyryl-CoA dehydrogenase  27.17 
 
 
382 aa  59.3  0.0000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  32.35 
 
 
389 aa  59.3  0.0000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2091  acyl-CoA dehydrogenase domain-containing protein  25.88 
 
 
386 aa  59.3  0.0000001  Thermobispora bispora DSM 43833  Bacteria  normal  0.0244674  normal  0.176746 
 
 
-
 
NC_008705  Mkms_1317  acyl-CoA dehydrogenase domain-containing protein  24.35 
 
 
388 aa  59.3  0.0000001  Mycobacterium sp. KMS  Bacteria  normal  normal  0.247959 
 
 
-
 
NC_009077  Mjls_1336  acyl-CoA dehydrogenase domain-containing protein  24.35 
 
 
388 aa  59.3  0.0000001  Mycobacterium sp. JLS  Bacteria  normal  0.11867  normal 
 
 
-
 
NC_009953  Sare_4695  acyl-CoA dehydrogenase type 2  25.3 
 
 
387 aa  58.5  0.0000002  Salinispora arenicola CNS-205  Bacteria  normal  0.46169  normal  0.258533 
 
 
-
 
NC_013525  Tter_1183  Acyl-CoA dehydrogenase type 2 domain protein  23.06 
 
 
390 aa  58.5  0.0000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_2547  Acyl-CoA dehydrogenase type 2 domain protein  24.71 
 
 
392 aa  58.5  0.0000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010322  PputGB1_2163  acyl-CoA dehydrogenase type 2  25.3 
 
 
395 aa  57.8  0.0000003  Pseudomonas putida GB-1  Bacteria  normal  0.893753  normal  0.219871 
 
 
-
 
NC_011884  Cyan7425_1173  Acyl-CoA dehydrogenase type 2 domain protein  28.23 
 
 
383 aa  57.4  0.0000005  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5178  acyl-CoA dehydrogenase-related protein  28.93 
 
 
393 aa  55.8  0.000001  Agrobacterium vitis S4  Bacteria  normal  0.897204  n/a   
 
 
-
 
NC_013159  Svir_20400  acyl-CoA dehydrogenase  23.62 
 
 
396 aa  56.2  0.000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.170444  normal 
 
 
-
 
NC_010002  Daci_4506  acyl-CoA dehydrogenase domain-containing protein  25 
 
 
369 aa  55.1  0.000002  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.841519 
 
 
-
 
NC_009565  TBFG_13303  acyl-CoA dehydrogenase fadE25  24.5 
 
 
389 aa  55.5  0.000002  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  26.51 
 
 
380 aa  54.7  0.000003  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3970  acyl-CoA dehydrogenase domain-containing protein  24.06 
 
 
376 aa  53.9  0.000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.493916  n/a   
 
 
-
 
NC_009485  BBta_2584  putative acyl-CoA dehydrogenase  33.33 
 
 
398 aa  53.9  0.000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0375347 
 
 
-
 
NC_007005  Psyr_3604  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  25.85 
 
 
393 aa  53.5  0.000006  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.339437 
 
 
-
 
NC_011146  Gbem_3575  acyl-CoA dehydrogenase domain protein  22.45 
 
 
380 aa  53.5  0.000007  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3226  acyl-CoA dehydrogenase-related protein  22.89 
 
 
380 aa  53.1  0.000009  Pseudomonas putida KT2440  Bacteria  normal  0.690171  normal 
 
 
-
 
NC_013501  Rmar_1974  acyl-CoA dehydrogenase domain protein  26.02 
 
 
673 aa  53.1  0.000009  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_5108  acyl-CoA dehydrogenase domain protein  25.77 
 
 
381 aa  52.4  0.00001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.671033  normal 
 
 
-
 
NC_013440  Hoch_2948  acyl-CoA dehydrogenase domain protein  24.21 
 
 
391 aa  52.8  0.00001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0163396  normal 
 
 
-
 
NC_010322  PputGB1_2538  acyl-CoA dehydrogenase type 2  22.75 
 
 
378 aa  52.8  0.00001  Pseudomonas putida GB-1  Bacteria  normal  0.844573  decreased coverage  0.00557828 
 
 
-
 
NC_002976  SERP1866  acyl-CoA dehydrogenase-related protein  24.23 
 
 
381 aa  52.4  0.00002  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0955  Acyl-CoA dehydrogenase type 2 domain protein  28.02 
 
 
398 aa  51.6  0.00002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0876  acyl-CoA dehydrogenase domain-containing protein  23.21 
 
 
387 aa  52  0.00002  Salinispora arenicola CNS-205  Bacteria  normal  0.189497  normal  0.119821 
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  29.48 
 
 
388 aa  52  0.00002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_008346  Swol_0268  butyryl-CoA dehydrogenase  24.06 
 
 
379 aa  52  0.00002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1842  acyl-CoA dehydrogenase domain-containing protein  22.22 
 
 
387 aa  51.2  0.00003  Sphingomonas wittichii RW1  Bacteria  normal  0.982054  normal 
 
 
-
 
NC_009767  Rcas_0150  acyl-CoA dehydrogenase domain-containing protein  30.77 
 
 
394 aa  50.8  0.00004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0171  butyryl-CoA dehydrogenase  25.71 
 
 
385 aa  50.8  0.00005  Mycobacterium sp. JLS  Bacteria  normal  normal  0.260341 
 
 
-
 
NC_007492  Pfl01_0239  Acyl-CoA dehydrogenase-like  24.4 
 
 
397 aa  50.4  0.00006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009714  CHAB381_1168  putative acyl-coa dehydrogenase  20.11 
 
 
372 aa  50.4  0.00006  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_1175  acyl-CoA dehydrogenase domain protein  28.38 
 
 
411 aa  50.4  0.00006  Haliangium ochraceum DSM 14365  Bacteria  normal  0.14538  normal 
 
 
-
 
NC_013744  Htur_4197  acyl-CoA dehydrogenase domain protein  25.07 
 
 
386 aa  50.1  0.00007  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.142048  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2881  acyl-CoA dehydrogenase type 2  21.7 
 
 
382 aa  50.1  0.00007  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.255861  n/a   
 
 
-
 
NC_013744  Htur_4420  acyl-CoA dehydrogenase domain protein  23.16 
 
 
383 aa  50.1  0.00008  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.135113  n/a   
 
 
-
 
NC_002947  PP_2772  monooxygenase, putative  23.73 
 
 
395 aa  49.3  0.0001  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  25.19 
 
 
379 aa  49.3  0.0001  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  27.35 
 
 
383 aa  49.3  0.0001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3188  acyl-CoA dehydrogenase type 2  21.32 
 
 
389 aa  48.9  0.0001  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1131  butyryl-CoA dehydrogenase  27.69 
 
 
392 aa  49.7  0.0001  Candidatus Koribacter versatilis Ellin345  Bacteria  hitchhiker  0.00519609  hitchhiker  0.000110962 
 
 
-
 
NC_009512  Pput_2981  acyl-CoA dehydrogenase type 2  23.81 
 
 
395 aa  48.9  0.0001  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
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