Gene Daci_4506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4506 
Symbol 
ID5750094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4930865 
End bp4931974 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content71% 
IMG OID641299607 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001565520 
Protein GI160899938 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.841519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTTT TGCAGCAACT CGAACCCCTC ATGCGCGAGA TCATCGCGCC CCAGGCCGCC 
CAGATTGACG AGCAGGCGCG CTACCCGCGC GCTGCGCTGG ATGCGCTGGC CGCAGCCGGC
CTGCTGGGCC TGATCAGCGC CAGCGAGGTG GGCGGCCGGG GCAAGGGCCT GGCCGAGGCG
GTACAGGTCA TCGAGCGCAT TGCCCAGGAC TGCCCCTGCA CGGCCATGGT GCTGACCATG
CACTACTGCG GCGTGGCACT GATCGAGCCC TTTGCCGATG ACGAGGTGCG CCGCGACATT
GCCGCCGGCC GCCACATCAC CACGCTGGCC GTGTCCGAGG CGGGATCGCG CAGCCATATC
TGGGCGCCCA CGGGCACGGC CACCGCCGCT GAAGATGTCA TCCACCTGAA TGCGCTCAAG
AGCATGATCA CCTCGGCCGG CGAGGCCGAT TCCTATGTCT GGATCTCGCG CGCCACGCAG
GGCGAGGGCA ATACGCTGTG GCTGGTGGAC AGCCGCCTGC CGGGGCTGTC CATTCCCGGG
CGCTTCAACG GCATGGGGCT GCGCGGAAAT GCGTCGTCGC CCATCGAGGC GCGCGATGTG
GGCGTGCCAC GCGCCCGCAT GCTGGGCGCA GATGGCGAGG GCGAGGCCGT GAAGGGCCGC
CACCTGATGC CCTTTTTCCC CACGCTGATC GCCACCACCT CCATCGGCCT GATGCAGGGC
GCACTGCGCC GCGCCGTGGC CCATGTGGCC GGCACGCGCT TTGCGGAAAG CGGCAGCTCG
CTGGCCGACC TGCCCACCAT CCGCGCCTAC CTGGCCCGCG CCCAGCTGCG CCTGGAGCAG
GCGCGCCTGC TGCGCGACGA CACCGTGGCC GCCGTGCAGG CCGCCCGCCC CGACACGCGC
ACGCGCCTGC TGCAGACCAA GGCCGCCGCC GCCGAAGCCG CGCTGGAGGT GACCGACATT
GCCATGCGCG TGTGCGGCGG CGCCGCCTTC CGCAAGGAGC TGGGCATAGA GCGCCTGTTC
CGCGATGCGC GTGCCGCCTC GGTCATGGCG CCCACCACCG ACGTGATCTA CGACATGCTC
GGCAAGGCCA TGTGCGAAGC CGCTGCCTGA
 
Protein sequence
MEVLQQLEPL MREIIAPQAA QIDEQARYPR AALDALAAAG LLGLISASEV GGRGKGLAEA 
VQVIERIAQD CPCTAMVLTM HYCGVALIEP FADDEVRRDI AAGRHITTLA VSEAGSRSHI
WAPTGTATAA EDVIHLNALK SMITSAGEAD SYVWISRATQ GEGNTLWLVD SRLPGLSIPG
RFNGMGLRGN ASSPIEARDV GVPRARMLGA DGEGEAVKGR HLMPFFPTLI ATTSIGLMQG
ALRRAVAHVA GTRFAESGSS LADLPTIRAY LARAQLRLEQ ARLLRDDTVA AVQAARPDTR
TRLLQTKAAA AEAALEVTDI AMRVCGGAAF RKELGIERLF RDARAASVMA PTTDVIYDML
GKAMCEAAA